Pairwise Alignments

Query, 434 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB from Erwinia amylovora T8

 Score =  340 bits (873), Expect = 4e-98
 Identities = 171/422 (40%), Positives = 260/422 (61%), Gaps = 7/422 (1%)

Query: 18  FSASTLAATEITWWHAMGGQLGETVNQLATDFNASQSDYKLTPVYKGSYTETLTAGIAAF 77
           FS S LA T+I++WH+M G+LGE VN LAT FN +  DY++ P YKG+Y ++L AGIAA 
Sbjct: 19  FSTSALATTDISFWHSMEGELGEEVNALATRFNETHPDYRIVPTYKGNYEQSLAAGIAAV 78

Query: 78  RAGQAPNILQVFDAGAATIMSSKGVAKPVQDLMIESGYPFTAQDYIAGVRNFYADNTGKM 137
           R G+AP ++QV++ G  T+M+SK +  PV ++   +G    A+ ++  V  +Y+D  G++
Sbjct: 79  RTGKAPAMMQVYEVGTTTMMASKAIV-PVYEVFKNAGITLDAKQFVPAVAGYYSDANGQL 137

Query: 138 VGMPFNSSTPVLYYNKDML--ASVNA-QAPQTYEQLEQVAAKLAEKGQA-GFAQSLTPWI 193
           +  PFNSSTPVLYY+KD    A +N  Q P+T++QL Q +A L + G + G+A     WI
Sbjct: 138 ISQPFNSSTPVLYYSKDAFKKAGLNPEQPPKTWQQLAQDSAALRKAGMSCGYASGWQGWI 197

Query: 194 MFENFKSRHNLPLSDKQNGYQDLSTKIMFNSDDMLMHVKKLKEWSDKGYYKYYGSDWDAN 253
             ENF + H  P++ + NG+     +++FN      H+  L+E + KG + Y+G   D  
Sbjct: 198 QIENFSAWHGQPVATQNNGFDGSDARLVFNKPLQAGHIAMLEEMNKKGDFTYFGRK-DEP 256

Query: 254 QTPFERGEVAMWMGSSGSFGGLRNRVKFNLGTTYLPYWESVTKNPTHTFIGGAALFALQG 313
              F  G+ AM   SSGS   +R   KFN G   +PY +SV   P +  IGGA+L+A++G
Sbjct: 257 TAKFYNGDCAMTTASSGSLADIRKYAKFNFGVGMMPYDDSVASAPQNAMIGGASLWAMKG 316

Query: 314 HTPAQDKGVAAFFAYLTKPETQMNWHKTTGYVPVTNAAYDLTKQSGYYQENPDAEVGVKQ 373
              A  KGVA F  +L +PE    WH+ TGY+P+T AAYDLTK+ G+YQ++P A++  +Q
Sbjct: 317 KDAATYKGVAQFMQFLAQPEIAAEWHQKTGYLPITTAAYDLTKRQGFYQQHPGADIATRQ 376

Query: 374 -LSLPDGEWTKGYRLGYYPQVREVMHREFDNIFSGRSTVESSLNKVEDESAKLLNRFART 432
            L+     +TKG RLG  PQ+R ++  E + +++G+ + +++L+       +LL RF R 
Sbjct: 377 MLNKAPLPYTKGMRLGNMPQIRTIVDEELEGVWTGKQSAQAALDNAVRRGNELLARFGRQ 436

Query: 433 VQ 434
            Q
Sbjct: 437 SQ 438