Pairwise Alignments

Query, 434 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB from Escherichia coli ECOR27

 Score =  335 bits (858), Expect = 2e-96
 Identities = 170/417 (40%), Positives = 247/417 (59%), Gaps = 8/417 (1%)

Query: 24  AATEITWWHAMGGQLGETVNQLATDFNASQSDYKLTPVYKGSYTETLTAGIAAFRAGQAP 83
           A T I +WH+M G+LG+ V+ LA  FNA   DYK+ P YKG+Y + L+AGIAAFR G AP
Sbjct: 23  AVTTIPFWHSMEGELGKEVDSLAQRFNAENPDYKIVPTYKGNYEQNLSAGIAAFRTGNAP 82

Query: 84  NILQVFDAGAATIMSSKGVAKPVQDLMIESGYPFTAQDYIAGVRNFYADN-TGKMVGMPF 142
            ILQV++ G AT+M+SK + KPV D+  E+G  F    ++  V  +Y+D+ TG ++  PF
Sbjct: 83  AILQVYEVGTATMMASKAI-KPVYDVFKEAGIQFDESQFVPTVSGYYSDSKTGHLLSQPF 141

Query: 143 NSSTPVLYYNKDMLASVNA---QAPQTYEQLEQVAAKLAEKG-QAGFAQSLTPWIMFENF 198
           NSSTPVLYYNKD          Q P+T++ L   AAKL   G + G+A     WI  ENF
Sbjct: 142 NSSTPVLYYNKDAFKKAGLDPEQPPKTWQDLADYAAKLKASGMKCGYASGWQGWIQLENF 201

Query: 199 KSRHNLPLSDKQNGYQDLSTKIMFNSDDMLMHVKKLKEWSDKGYYKYYGSDWDANQTPFE 258
            + + LP + K NG+      + FN  + + H+  L+E + KG + Y G   D +   F 
Sbjct: 202 SAWNGLPFASKNNGFDGTDAVLEFNKPEQVKHIAMLEEMNKKGDFSYVGRK-DESTEKFY 260

Query: 259 RGEVAMWMGSSGSFGGLRNRVKFNLGTTYLPYWESVTKNPTHTFIGGAALFALQGHTPAQ 318
            G+ AM   SSGS   +R   KFN G   +PY       P +  IGGA+L+ +QG     
Sbjct: 261 NGDCAMTTASSGSLANIREYAKFNYGVGMMPYDADAKDAPQNAIIGGASLWVMQGKNKET 320

Query: 319 DKGVAAFFAYLTKPETQMNWHKTTGYVPVTNAAYDLTKQSGYYQENPDAEVGVKQ-LSLP 377
             GVA F  +L KPE    WH+ TGY+P+T AAYDLT++ G+Y++NP A+   +Q L+ P
Sbjct: 321 YTGVAKFLDFLAKPENAAEWHQKTGYLPITKAAYDLTREQGFYEKNPGADTATRQMLNKP 380

Query: 378 DGEWTKGYRLGYYPQVREVMHREFDNIFSGRSTVESSLNKVEDESAKLLNRFARTVQ 434
              +TKG RLG  PQ+R ++  E +++++G+ T + +L+   +   +LL RF ++ +
Sbjct: 381 PLPFTKGLRLGNMPQIRVIVDEELESVWTGKKTPQQALDTAVERGNQLLRRFEKSTK 437