Pairwise Alignments

Query, 434 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB from Dickeya dianthicola ME23

 Score =  338 bits (868), Expect = 2e-97
 Identities = 173/417 (41%), Positives = 252/417 (60%), Gaps = 8/417 (1%)

Query: 19  SASTLAATEITWWHAMGGQLGETVNQLATDFNASQSDYKLTPVYKGSYTETLTAGIAAFR 78
           SA   A TEI +WH+M G+LG+TVN LA  FN + SD  + PVYKG+Y ++L AGIAAFR
Sbjct: 20  SAQAQAVTEIPFWHSMEGELGKTVNSLADRFNQTHSDVNIVPVYKGNYEQSLAAGIAAFR 79

Query: 79  AGQAPNILQVFDAGAATIMSSKGVAKPVQDLMIESGYPFTAQDYIAGVRNFYADN-TGKM 137
           +G AP ILQV++ G AT+M+SK + KPV  +  ++G P+    ++  V  +Y+D+ TG +
Sbjct: 80  SGNAPAILQVYEVGTATMMTSKAI-KPVYQVFKDAGVPYDENIFVPTVSGYYSDSKTGHL 138

Query: 138 VGMPFNSSTPVLYYNKDMLASVNA---QAPQTYEQLEQVAAKLAEKG-QAGFAQSLTPWI 193
           +  PFNSSTPVLYYNKD          Q P+T++Q+ +  AKL   G + G+A     WI
Sbjct: 139 LSQPFNSSTPVLYYNKDAFKKAGLDPEQPPKTWQQMAEYTAKLRASGMKCGYASGWQGWI 198

Query: 194 MFENFKSRHNLPLSDKQNGYQDLSTKIMFNSDDMLMHVKKLKEWSDKGYYKYYGSDWDAN 253
             ENF + + LP++ K NG+  L   + FN    + H++ L++ + KG + YYG   D  
Sbjct: 199 QIENFSAWNGLPIATKNNGFDGLDAVLEFNKPVQVKHIQMLEDMNKKGDFTYYGRK-DEP 257

Query: 254 QTPFERGEVAMWMGSSGSFGGLRNRVKFNLGTTYLPYWESVTKNPTHTFIGGAALFALQG 313
              F  G+ AM   SSGS   +R   KFN G   +PY   V   P +  IGGA+L+ + G
Sbjct: 258 TEKFYNGDCAMTTASSGSLANIRQYAKFNYGVAMMPYDADVKGAPQNAIIGGASLWVMNG 317

Query: 314 HTPAQDKGVAAFFAYLTKPETQMNWHKTTGYVPVTNAAYDLTKQSGYYQENPDAEVGVKQ 373
              A  KGVA F  +L+ PE    WH+ TGY+P+T AAY+LTKQ G+Y +NP A++  +Q
Sbjct: 318 KDAATYKGVAEFMQFLSTPEIAAEWHQKTGYLPITTAAYELTKQQGFYDKNPGADIATRQ 377

Query: 374 -LSLPDGEWTKGYRLGYYPQVREVMHREFDNIFSGRSTVESSLNKVEDESAKLLNRF 429
            L+     +TKG RLG  PQ+R ++  E +++++G+ T + +L+   +    LL RF
Sbjct: 378 MLNKEPLPFTKGLRLGNMPQIRTIVDEELESVWTGKKTPQQALDAAVERGNALLRRF 434