Pairwise Alignments

Query, 434 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., extracellular solute-binding protein from Dickeya dianthicola ME23

 Score = 55.1 bits (131), Expect = 4e-12
 Identities = 69/302 (22%), Positives = 111/302 (36%), Gaps = 33/302 (10%)

Query: 65  SYTETLTAGIAAFRAGQAPNILQVFDAGA--ATIMSSKGVAKPVQDLMIESGYPFTAQDY 122
           S+ +T      A  +G  P + QV   G     ++  K +  P+ D   + G+     D 
Sbjct: 72  SFEDTRIPLKLALTSGDGPQVAQVNQGGGDMGALVKDK-LLYPLDDYAKQYGWTTRFPDS 130

Query: 123 IAGVRNFYADN----TGKMVGMPFNSSTPVLYYNKDMLASVNAQAPQTYEQLEQVAAKLA 178
           I   RN ++D     +G + G+        LYYNK +L       PQT  +LE+  A L 
Sbjct: 131 ILQ-RNRWSDKQDFGSGTLYGVASLGEMIGLYYNKALLDKAGIAVPQTLPELEKAMATLK 189

Query: 179 EKG---------QAGFAQSLTPWIMFENFKSRHNLPLSDKQNGYQDLSTKIMFNSDDMLM 229
            KG              Q L   +   +  S +  PL     G         FN   +L 
Sbjct: 190 AKGIPPLMLGLLDGNMGQQLLSTLWETHIDSANRKPLDALIYGVGG-----TFNDPRLLK 244

Query: 230 HVKKLKEWSDKGYY--KYYGSDWDANQTPFERGEVAMWMGSSGSFGGLRNRVKFNLGTTY 287
               +++W+ KGY+   + G   D   T F+ G+ A  +  +   G  +     +  T  
Sbjct: 245 AAGIMQDWNQKGYFFPGFQGIGHDDAATLFQNGQSAFLISGTWYLGQFKQNKDIHFAT-- 302

Query: 288 LPYWESVTKNPTHTFIGGAAL---FALQGHTPAQDKGVAAFFAYLTKPETQMNWHKTTGY 344
           +P+ E V        +GG  L         T  Q    A F  Y+   ++  N     G+
Sbjct: 303 IPHAEGVNH---ALMVGGTDLAYSITNMAKTKEQRDDAAKFIDYIVS-DSMANLWLQAGF 358

Query: 345 VP 346
           +P
Sbjct: 359 LP 360