Pairwise Alignments

Query, 434 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 451 a.a., sn-glycerol-3-phosphate-binding periplasmic protein UgpB from Azospirillum sp. SherDot2

 Score =  278 bits (712), Expect = 2e-79
 Identities = 158/433 (36%), Positives = 228/433 (52%), Gaps = 9/433 (2%)

Query: 7   TGLLTATASGVFSASTLAATEITWWHAMGGQLGETVNQLATDFNASQSDYKLTPVYKGSY 66
           T  L   A+   SA     T I +WH +   LG  + Q+A DFN SQ   ++   YKGSY
Sbjct: 16  TSALLFAAALPGSALAQQKTVIDFWHGLPQPLGGQLEQIAKDFNDSQQAVQVNASYKGSY 75

Query: 67  TETLTAGIAAFRAGQAPNILQVFDAGAATIMSSKGVAKPVQDLMIESGYPFTAQDYIAGV 126
            ET+ A IAAFRAG AP+I+Q+F+ G AT+M++    KPV  LM E+G  F A  YI  V
Sbjct: 76  PETMQAAIAAFRAGNAPHIVQMFEVGTATMMAAGPAVKPVYQLMQETGASFDADAYIPAV 135

Query: 127 RNFYADNTGKMVGMPFNSSTPVLYYNKDMLASVNA---QAPQTYEQLEQVAAKLAEKGQA 183
           + +Y+   GKM+ +PFNSS+ +++YNKD          + P T+ ++ +   KL   G  
Sbjct: 136 KGYYSSKDGKMMALPFNSSSTIMFYNKDAFQKAGLDPNKPPATWPEMIEATKKLKASGST 195

Query: 184 GFAQSLTP-WIMFENFKSRHNLPLSDKQNGYQDLSTKIMFNSDDMLMHVKKLKEWSDKGY 242
               +  P W  FE   + HN P + + NG+  L+ ++  ++   + HV+ L +    G 
Sbjct: 196 CPLTTAWPVWAQFEQLGAIHNTPFASQGNGFGGLNAELKIDAPLYVKHVQTLIDMQKDGL 255

Query: 243 YKYYGSDWDANQTPFERGEVAMWMGSSGSFGGLRNRVKFNLGTTYLPYWESVTKN-PTHT 301
           +KY G D +     F  GE AM   SSG    +     F  G   LPYW    K+ P ++
Sbjct: 256 FKYGGRD-NKPDALFPSGECAMIHASSGLRSRILKEATFAWGAAPLPYWPEFAKDGPKNS 314

Query: 302 FIGGAALFALQG--HTPAQDKGVAAFFAYLTKPETQMNWHKTTGYVPVTNAAYDLTKQSG 359
            IGGAA + +     TPA+ K V+ FF YL KPE    WH  TGYVPVT   ++L K  G
Sbjct: 315 IIGGAAFWVMTSPKRTPAEYKAVSQFFTYLAKPEVDAKWHMDTGYVPVTMKGFELAKAQG 374

Query: 360 YYQENPDAEVGVKQLS-LPDGEWTKGYRLGYYPQVREVMHREFDNIFSGRSTVESSLNKV 418
           YY++NP A+V   QL+  P  E + G RLG  P++R ++  E +  F G+   + +L+  
Sbjct: 375 YYEKNPGADVPAAQLTRTPTTENSMGLRLGNLPEIRNIIQEELEKAFQGQQDAKQALDAS 434

Query: 419 EDESAKLLNRFAR 431
                 +L  F R
Sbjct: 435 IKRGNTVLRNFER 447