Pairwise Alignments

Query, 434 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 421 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 65.9 bits (159), Expect = 2e-15
 Identities = 83/358 (23%), Positives = 145/358 (40%), Gaps = 34/358 (9%)

Query: 8   GLLTATASGVFSASTLAATEITWWHAMGGQLGETVNQLATDFNASQSDYKLTPVYKGSYT 67
           GL+   ++  F+A+   A EI +W  +     + +++L  +F  +  D  +  V    Y 
Sbjct: 13  GLVAGFSTFAFNAAQ--AVEIEYWQYVFDTRVKAMDELIAEFQKANPDITVKQV-TFPYA 69

Query: 68  ETLTAGIAAFRAGQAPNILQVFDAGAATIMSSKGVAKPV-QDLM----IESGYPFTAQDY 122
           +  T  IAA  +G+ P+++Q+F  G     ++ G+ +P+ +D      IES + F     
Sbjct: 70  DYQTRVIAANLSGKGPDVMQLF-YGWLDKFAAGGILQPLPKDAFPHDKIESEF-FPIVSA 127

Query: 123 IAGVRNFYADNTGKMVGMPFNSSTPVLYYNKDMLASVNAQA---PQTYEQLEQVAAKLAE 179
           +    ++Y        G+P    +  L+YNK +       A   P+T ++    A K+A+
Sbjct: 128 MKRGDDYY--------GLPTAVRSLALFYNKKLFTEAGLDAANPPKTLDEFVAAAEKIAK 179

Query: 180 KGQAGFAQSLTPWIMFENFKSRHNLPLSDKQNG---YQDLSTKIMFNSDDMLMHVKKLKE 236
              AG        +       +    +  +Q G   Y D   K+ +NS+     ++ LK 
Sbjct: 180 HDAAGNLTVAGSTLDMGGQDHQWWREVLIRQYGGEPYADNDQKVTYNSEP---GIQALKF 236

Query: 237 WSDKGYYKYYGSD--WDANQTPFERGEVAMWMGSSGSFGGLRNRVKFNLGTTYLPYWE-S 293
           ++     K  G     D  Q  F  G+  M +  +   G  R    F  G T LP  + +
Sbjct: 237 YTSLQLEKKIGQVGFMDEGQAAFRAGKAGMTIDGTFRLGSFRTIKDFEWGVTELPTNDKN 296

Query: 294 VTKNPTHTFIGGAALFALQGHTPAQDKGVAAFFAYLTKPETQMNWHKTTGYVPVTNAA 351
           +  N    F  G +         A  K    F AY++ PE    W KT G +P   +A
Sbjct: 297 IRSNYASYFANGISAKTTGEELEASKK----FLAYISSPEAMAIWLKTVGELPARRSA 350