Pairwise Alignments

Query, 434 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 410 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 62.8 bits (151), Expect = 2e-14
 Identities = 101/439 (23%), Positives = 180/439 (41%), Gaps = 59/439 (13%)

Query: 3   KVWLTG--LLTATASGVFSASTLAATEITWWHAMGGQLGETVNQLATDFNASQSDYKLTP 60
           K  +TG  +L + ++G  +A     T   W  ++   +    N L  +FNA  +  K+  
Sbjct: 5   KFMMTGALVLASVSAGAMAAHAEDVTLTLW--SLDRDIQPAPN-LIKEFNALNNGIKIE- 60

Query: 61  VYKG-SYTETLTAGIAAFRAGQAPNILQVFDAGAATIMSSKGVAKPVQDLMIESGYPFTA 119
            Y+   + + ++  + A+  G AP+I+ + +   A + +S+G    V D++ +S    T 
Sbjct: 61  -YRQLQFDDVVSESMRAYSTGNAPDIIAIDNPNHA-MFASRGAFLDVTDMIAKSDVIKTE 118

Query: 120 QDYIAGVRNFYADNTGKMVGMPFNSSTPVLYYNKDMLASVN---AQAPQTYEQLEQVAAK 176
             +   +++   D  GK  G+P  ++T  LYYNKD+  +     A+ PQT+++L   A K
Sbjct: 119 NYFPGPLKSVTWD--GKYFGVPKATNTIALYYNKDLFKAAGLDAAKPPQTWDELVDAARK 176

Query: 177 LAEKGQAGFAQSLTPWIMFENFKSRHNLPLSDKQNGYQDLSTKIMFNSDDMLMHVKKLKE 236
           L    +  +  S +     E   +   LP +         +T    N+D     VK L+ 
Sbjct: 177 LTNPAKNVYGISFSAKANEEG--TFQFLPWAQMAG-----ATYKNINTDGA---VKALET 226

Query: 237 WSDKGYYKYYGSD------WDANQTPFERGEVAMWMGSSGSFGGLRNRVKFNLGTTYLPY 290
           W      K    D      WD+  T F  G  AM +        +    KF+ G T LP 
Sbjct: 227 WKTLLDEKLASPDTLTRSQWDSTAT-FNAGNAAMAISGPWEIDRMLKDAKFDWGVTLLPV 285

Query: 291 WESVTKNPTHTFIG--GAALFALQGHTPAQDKGVAAFFAYLTKPETQMNWHKTTGYVPVT 348
                  P  + +G    A+F+   H PA+      FFA   K     +  K  G +P  
Sbjct: 286 --PTPDAPRSSAMGDYNWAIFSKTKH-PAEAFKAIEFFASKDK-----DMFKNFGQLP-- 335

Query: 349 NAAYDL-TKQSGYYQENPDAEVGVKQLSL-----PDGEWTKGYRLGYYPQVREVMHREFD 402
            A  D+    +G   ++   +  V+QL       P  EW         P++ + +     
Sbjct: 336 -ARSDIPVPPTGNALKDEALKTFVEQLKYAQPRGPSPEW---------PKISKAIQDAIQ 385

Query: 403 NIFSGRSTVESSLNKVEDE 421
              SG+ T +++L++  ++
Sbjct: 386 GALSGQMTPKAALDQAAEK 404