Pairwise Alignments

Query, 434 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 416 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 52.4 bits (124), Expect = 3e-11
 Identities = 77/353 (21%), Positives = 138/353 (39%), Gaps = 38/353 (10%)

Query: 95  TIMSSKG---------VAKPVQDLMIESGYPFTAQDYIAGVRNFYADNT--GKMVGMPFN 143
           T+MS+K          V +P Q         F+ +D  A +  +   NT  GK+V +P  
Sbjct: 80  TVMSAKDSSLDVLMLDVIRPAQFATAGWTSDFSGKDLSAYLPTYAEANTVNGKIVALPAF 139

Query: 144 SSTPVLYYNKDMLASVNAQAPQTYEQLEQVAAKLAEKGQAGFAQSLT-PWIMFENFKSRH 202
           + +  LYY KD+L     + P T+++L++ + K+ E  +    Q L+      E      
Sbjct: 140 ADSMFLYYRKDLLDKYGIKPPTTWDELKEASKKVMEGEKNPELQGLSFQGKAIEGAVCTF 199

Query: 203 NLPLSDKQNGYQDLSTKIMFNSDDMLMHVKKLKEWSDKGYYKYYGSD--WDANQTPFERG 260
            LP   +     + + K+ F++   +  +K  K + D G  K   S+   D  +  F+ G
Sbjct: 200 LLPYWSEGKSLVE-NGKLNFDNKAAVDSLKLWKSFVDDGISKKNISEVATDDTRKEFQAG 258

Query: 261 EVAM---WMGSSGSFGGLRNRVKFNLGTTYLPYWESVTKNPTHTFIGGAALFALQGHTPA 317
           +V     W  +   F G  ++V   +G   LP      K    T   G   F +  ++  
Sbjct: 259 KVLFAVNWSYAWTHFQGKESQVNDKVGVARLP----AVKGGEQTTCLGGWEFGVSAYSKQ 314

Query: 318 QDKGVAAFFAYLTKPETQMNWHKTTGYVPVTNAAY---DLTKQSGYYQENPDAEVGVKQL 374
           QD+       YL+  +           +P   A Y   D+TK   ++ +           
Sbjct: 315 QDE-AKKLVEYLSSQDVSKFMAINAALLPTYAALYKDADVTKTIPWFAD----------- 362

Query: 375 SLPDGEWTKGYRL-GYYPQVREVMHREFDNIFSGRSTVESSLNKVEDESAKLL 426
           +LP  E  K   +   Y +V E +    + + +G  T E    ++E    ++L
Sbjct: 363 ALPVVETAKARPVTPRYNEVSETIRTTVNGVLAGVMTPEDGAKQMESRLRRVL 415