Pairwise Alignments

Query, 434 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., sn-glycerol 3-phosphate ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  230 bits (587), Expect = 6e-65
 Identities = 135/440 (30%), Positives = 228/440 (51%), Gaps = 16/440 (3%)

Query: 5   WLTGLLTATASGVFSASTLAATEITWWHAMGGQLGETVNQLATDFNASQSDYKLTPVYKG 64
           ++ G+  A A G  +A+    T+  +W+ + G LGE V +    FN +Q+D+++    + 
Sbjct: 9   FVAGIAVAAAFGA-TAAHAEKTKFEFWYGLSGDLGERVQETCKKFNDAQADFEIVCTSQN 67

Query: 65  SYTETLTAGIAAFRAGQAPNILQVFDAGAATIMSSKGVAKPVQDLMIESGYPFTAQDYIA 124
            Y  TL   IAA+RA + P I Q++DAG   +M SK    P + LM ++GY     +Y  
Sbjct: 68  DYESTLQNTIAAYRAKKQPAITQIYDAGTLDMMLSKAFV-PAKKLMADNGYKIDWNNYFP 126

Query: 125 GVRNFYADNTGKMVGMPFNSSTPVLYYNKDMLASVNAQ-APQTYEQLEQVAAKLAEKG-Q 182
           G+ N+YA  +G++   P+NSST V YYN D          P T+E++E+ + KL   G +
Sbjct: 127 GIANYYATASGELNSFPYNSSTAVFYYNVDAFEKAGITFKPDTWEEVEEASKKLKAAGFE 186

Query: 183 AGFAQSLTPWIMFENFKSRHNLPLSDKQNGYQDLSTKIMFNSDDMLMHVKKLKEWSDKGY 242
              A +   W++ E F + HN P++ K NGYQ L  ++  N    +  VK  K+  D+  
Sbjct: 187 CPLAFNFDTWMLMEQFSAIHNQPIATKANGYQGLDAELTINKTKFVDQVKFFKKMQDEKL 246

Query: 243 YKYYGSDWDANQTP-FERGEVAMWMGSSGSFG----GLRNRVKFNLGTTYLPYWESVTKN 297
           +         +  P F      M+M S  + G    G+   VK+++    LP W+   ++
Sbjct: 247 FVVKTKQLGMDILPAFTSQTCQMFMTSIANHGTVGKGMPAGVKWDV--VMLPIWKGTERH 304

Query: 298 PTHTFIGGAALFALQGHTPAQDKGVAAFFAYLTKPETQMNWHKTTGYVPVTNAAYDLTKQ 357
             ++ +GGA+L+ + G   A+ KG AAF  ++ +P+    W   TGY+PVT   +D  K 
Sbjct: 305 --NSLVGGASLWVMAGRPDAEYKGAAAFLNFIAQPDMVEWWSTVTGYIPVTKTGFDAMKA 362

Query: 358 SGYYQENP--DAEVGVKQLSL-PDGEWTKGYRLGYYPQVREVMHREFDNIFSGRSTVESS 414
           +G+Y + P    E  ++ L+  P  E+T+G RLG + Q+R+ +    + IF   + +++ 
Sbjct: 363 NGFYDKAPYKGREKAIESLTFTPPSEYTRGIRLGGFTQIRKEVATSLEAIFMQNADIQAE 422

Query: 415 LNKVEDESAKLLNRFARTVQ 434
           L+K  + S   L RF +T +
Sbjct: 423 LDKAVERSNAGLRRFEKTYE 442