Pairwise Alignments

Query, 457 a.a., flagellar motor protein MotA from Vibrio cholerae E7946 ATCC 55056

Subject, 220 a.a., MotA/TolQ/ExbB proton channel family protein from Rhodanobacter sp000427505 FW510-R12

 Score = 80.9 bits (198), Expect = 4e-20
 Identities = 62/201 (30%), Positives = 94/201 (46%), Gaps = 15/201 (7%)

Query: 262 LQAGGVIGNVILVLLGVGLIIALYRGAILAT-----------LRQKIKAQLKNPEQPGN- 309
           L AGG     IL+   + L I L R   L             +RQ +++   +P+   N 
Sbjct: 5   LLAGGWAMVPILISSAIALAIVLERCWTLRRKSVLPPGLGDEVRQWVRSGQLDPQHLENL 64

Query: 310 ---NPLGRILAVYNKEQQRSVEALELRLLEAVVDEQNHLETGLSMLKLLAALAPMLGLLG 366
              +PLG +LA     +++S E ++ R+ +      + +E  L+ L  +A + P+LGL G
Sbjct: 65  ANGSPLGELLASALVVRRQSRELIKERIEDTGRHVVHRMERYLNTLGTIALIGPLLGLFG 124

Query: 367 TVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLLLAHNILSAQAEAIRN 426
           TV G+I  F  +   G GDP  MAGGI  AL+ T  GL  AIP  + H    ++    R 
Sbjct: 125 TVIGLIRMFMEVMAGGIGDPARMAGGIGEALICTAAGLTVAIPAYVLHRYFRSRVAGYRI 184

Query: 427 ILEKQGIGLVAQQAERDCGAT 447
            +EKQ   L+ +       AT
Sbjct: 185 EMEKQATALLDELTLATAAAT 205