Pairwise Alignments

Query, 457 a.a., flagellar motor protein MotA from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., Biopolymer transport protein ExbB from Alteromonas macleodii MIT1002

 Score =  267 bits (682), Expect = 6e-76
 Identities = 161/450 (35%), Positives = 259/450 (57%), Gaps = 9/450 (2%)

Query: 2   TLKKTTLALA-LSLP---FAFASVANASNSLVQQATQEKAQQQQHNLQREAGFVQTAQEL 57
           T+K+  + LA LS+    FA +  A   ++L++Q  + +  Q Q N QRE  F     E 
Sbjct: 4   TVKRIAVGLAALSISVGAFAQSDRAMDLDALLKQLEEGQFAQSQQNKQRERDFQAQRAEQ 63

Query: 58  QAAKAELLAERNRLQKEADQLSSQFSDNENTLARLEETLRLETGSLGEMFGVVRQNAKEL 117
                E   +R+++  +++QL +QF +NE  LA L   L    GSL E+FGV++Q A + 
Sbjct: 64  DRILRETREKRDQMLAQSEQLETQFEENEFKLADLNGALDTRLGSLKELFGVLQQIAGDT 123

Query: 118 QSELDQSVTGVEPRAHQQSID----DVVAAKTLPSMAQLRGLWQAMSEEIRASGQVQTTE 173
           +++   SV   +       +D    D+ ++  L S+ ++  +W  M  E+  +G+V T +
Sbjct: 124 KNKFYNSVVSAQIPGRADFLDKMAQDMGSSSKLASIEEIERVWFEMQREMTEAGKVTTFK 183

Query: 174 IQWLNGQGETQTVPALRLGSLGLISEQGYVKWDNARQQALSYQQLPSDFPTFSHIRTLVD 233
              +   GE      +R+G   L+++  Y++++          + P+D    S       
Sbjct: 184 TDVVEAGGEKVNKSVVRVGPFALVADGKYLEYNGVTGTVSELVRQPADRYMDSAAELQAS 243

Query: 234 -GDVVTMKVDPSRGVLLEQLALTPTLSQRLQAGGVIGNVILVLLGVGLIIALYRGAILAT 292
            G++V   +DP+ G +L  L   P L +R++ GGV+G +IL++   GL++AL R   L  
Sbjct: 244 SGELVQFGIDPTGGSILGLLVQAPNLQERVEQGGVVGYIILIVGAFGLLLALERLVTLTL 303

Query: 293 LRQKIKAQLKNPEQPGNNPLGRILAVYNKEQQRSVEALELRLLEAVVDEQNHLETGLSML 352
           +R K+  QLK+ E   NNPLGR+L V ++     VEALEL L EA++ E   L   L+++
Sbjct: 304 IRMKVNKQLKSKEVNTNNPLGRVLKVRDEHPDADVEALELHLTEAILGEVPKLGRNLTII 363

Query: 353 KLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTVEGLIAAIPLLL 412
           K+++ +AP++GLLGTVTGMI TFQ IT FG GDPK+MAGGIS ALVTTV GL+ AIP+ L
Sbjct: 364 KIISVVAPLMGLLGTVTGMINTFQAITLFGTGDPKLMAGGISTALVTTVLGLVVAIPMTL 423

Query: 413 AHNILSAQAEAIRNILEKQGIGLVAQQAER 442
            + +L+ +++ I  IL++Q  G++A++AER
Sbjct: 424 LYAMLNTRSKNIVYILQEQASGVIAERAER 453