Pairwise Alignments

Query, 180 a.a., MotA/TolQ/ExbB proton channel family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., Biopolymer transport protein ExbB from Alteromonas macleodii MIT1002

 Score = 81.3 bits (199), Expect = 2e-20
 Identities = 56/174 (32%), Positives = 90/174 (51%), Gaps = 16/174 (9%)

Query: 16  LDEFMAQGGAVLWWLAVVVLLCWLLVIERLLFLSVTFPKQRQHW----------VDLWLQ 65
           L E + QGG V + + +V     LL +ERL+ L++   K  +            +   L+
Sbjct: 269 LQERVEQGGVVGYIILIVGAFGLLLALERLVTLTLIRMKVNKQLKSKEVNTNNPLGRVLK 328

Query: 66  RADQH-----SWFARSIREQWLGEAHNALNQNLNLIKVLVAICPMLGLLGTVTGMISVFD 120
             D+H           + E  LGE    L +NL +IK++  + P++GLLGTVTGMI+ F 
Sbjct: 329 VRDEHPDADVEALELHLTEAILGEVPK-LGRNLTIIKIISVVAPLMGLLGTVTGMINTFQ 387

Query: 121 VMATQGSSDPKLMASGISLATLPTMAGMVAALAGLFVHARLSKTCRGLEMKLEQ 174
            +   G+ DPKLMA GIS A + T+ G+V A+    ++A L+   + +   L++
Sbjct: 388 AITLFGTGDPKLMAGGISTALVTTVLGLVVAIPMTLLYAMLNTRSKNIVYILQE 441