Pairwise Alignments

Query, 134 a.a., biopolymer transporter exbD2 from Vibrio cholerae E7946 ATCC 55056

Subject, 142 a.a., biopolymer transporter ExbD from Pseudomonas simiae WCS417

 Score = 55.1 bits (131), Expect = 4e-13
 Identities = 35/130 (26%), Positives = 69/130 (53%), Gaps = 6/130 (4%)

Query: 6   RTSKQEEAQIDLTSMLDIVFIMLIFFIVTSSFVRESGVEVNRPTA---AHAVSQKQAGIF 62
           R  ++E   I+L S++D+VFI+L+FF+VT++F R++ + V+ P A   + A  Q+   + 
Sbjct: 4   RRKQRENVDINLASLIDVVFILLLFFVVTTTFTRQTELRVDLPEAVSGSPAEDQQVKQLD 63

Query: 63  VAITAANDIYIDKRQVDVERVQATLEHLLLD---QPDASLVIQADEHAFNGTVVKVMDAA 119
           +AI+A     ++ + ++   + + ++ L  +        L I AD    +  V+  MDAA
Sbjct: 64  IAISADGVFSVNNQLLEKNDLASLMDALQKESGGDTKLPLSISADGKTQHQAVITAMDAA 123

Query: 120 KGAGVKSIAL 129
              G   + +
Sbjct: 124 GKLGFSHLRM 133