Pairwise Alignments

Query, 134 a.a., biopolymer transporter exbD2 from Vibrio cholerae E7946 ATCC 55056

Subject, 141 a.a., Biopolymer transport protein ExbD/TolR from Variovorax sp. SCN45

 Score = 57.8 bits (138), Expect = 6e-14
 Identities = 38/131 (29%), Positives = 72/131 (54%), Gaps = 4/131 (3%)

Query: 6   RTSKQEEAQIDLTSMLDIVFIMLIFFIVTSSFVRESGVEVNRPTA-AHAVSQKQAGIFVA 64
           R   ++E +I+L   +D++ ++LIF ++++++ + + +++  PTA   A       + VA
Sbjct: 4   RHGARDEPEINLIPFIDVLLVILIFLMLSTTYSKFTEMQLRLPTADVDAQRDYPKEVIVA 63

Query: 65  ITAANDIYIDKRQV---DVERVQATLEHLLLDQPDASLVIQADEHAFNGTVVKVMDAAKG 121
           ++A     I+K  V   +VE V A L        D+ ++I AD  + +  VV VM+AA+ 
Sbjct: 64  VSADGRYSINKTPVADRNVEAVAAALAAAATGGKDSVVIISADATSPHQAVVTVMEAARR 123

Query: 122 AGVKSIALAAE 132
           AG+  I  AA+
Sbjct: 124 AGLMQITFAAQ 134