Pairwise Alignments

Query, 392 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 421 a.a., Flp pilus assembly protein TadD, contains TPR repeats from Alteromonas macleodii MIT1002

 Score =  117 bits (293), Expect = 6e-31
 Identities = 94/372 (25%), Positives = 180/372 (48%), Gaps = 15/372 (4%)

Query: 27  TASKVVKANQLAQENKVKEAIQILKQAELSRSYDRAYVARMLG-VFYWQNEQIPAAIASL 85
           T  KV KA +   E++V EA+ +L + + S  +DRAYV R +G +   Q  Q   A+  L
Sbjct: 50  TGKKVQKAFEFYNEDQVNEALNVLYEIDASDDFDRAYVKRFIGNLLAAQEGQGGKALGYL 109

Query: 86  KLAVESNELQDDQAWTTRKMLADLLISQQEYRSALKHYYTLAQAIPADQKGNELWLRISQ 145
             +VE   L D +   T K+L DL + +++Y  A+K Y         +    +++ R++Q
Sbjct: 110 VESVEPKVLNDLEHSQTLKLLGDLSMQEEKYTDAIKWYNKWMDFTCKEDA--DVYTRLAQ 167

Query: 146 LHFQMQEWKAVLNGMQQYAQFQTKDAVLPLSLQLGAQLNLEQWKPGILTLKRLLVLEPQK 205
            +F+ ++   ++    +      +    P  L+L +    + +   +   + L+   PQ+
Sbjct: 168 AYFESKQLAKMVEPADKAIALYEEPNKNPYVLKLTSYYERKMYPETVAVAEDLVRTFPQE 227

Query: 206 TEWWRQLVSLELRVGQKKEALSTLALAKMQKVALNQQDLRLLAQLYAQNGIPERAAQVME 265
             WW +L    + V   K+ LSTL LA MQ     + +++ LAQLY  NG+P +AA+++E
Sbjct: 228 KTWWSRLGFFYILVEDYKKGLSTLELAYMQGYLEKESEIKTLAQLYQSNGMPYKAAKLLE 287

Query: 266 SLDE---AQSNQQLITERAIYWQRAKEWDKAIATWRLAATK--DAKYHWHVAQLLLQEGH 320
              +    +++  ++   A  + +AK +  A   +  AA K  D +++     LLL    
Sbjct: 288 KHVKEGLLKNDADMLANVANAYHQAKNFKTAADLYAQAAAKSSDPEHYRKQGTLLLVAED 347

Query: 321 YQQALAELDQVKER--DKQAQVALAKTRALYKLNQFEAA---LVQAKRADSLQSSESAKQ 375
           Y+ A+  L+   ER  +   ++      A +    F++A   + +AK+  SL+ + +A  
Sbjct: 348 YKGAIKALENALERGAEDPEKIHFTLMEANFYAGNFKSAYKHVQEAKKDRSLRRNAAA-- 405

Query: 376 WIKYLSQQRQTQ 387
           W  Y+ ++ + +
Sbjct: 406 WEPYIKEKAKNR 417