Pairwise Alignments

Query, 327 a.a., DUF3080 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score =  100 bits (248), Expect = 8e-26
 Identities = 98/371 (26%), Positives = 158/371 (42%), Gaps = 53/371 (14%)

Query: 2   RLSVVLAALLLLTGCEPRLAIDADFDRYLSRIANVQQ-------RDALSPPAMAAQSLPE 54
           R  V+  AL  L GC     +    D Y +R++ V          D ++ P      L +
Sbjct: 21  RAGVISVALFALLGCFGGSTVKQSIDDYAARLSRVLDTPLPDSFNDKITTPL---PKLAD 77

Query: 55  KRELLIAIDPVTISLLDSYELRQCGLFELIAERNSILGKVQDEFREWDYQVALLNGIQGC 114
              L  AI+ V I+L + Y L+ C L  ++AERN+ LGK Q   +   Y+  LLN ++ C
Sbjct: 78  SATLKHAIEGVNINLREFYALQDCELGTVVAERNTSLGKSQLPSQRLVYESKLLNVLKSC 137

Query: 115 ---LT----SPQLSQSLKAQLLDIQNIKQQELASRWHNLLYTSDTMRTQLS--------- 158
              LT    S Q + +L A +   +  K Q+ +  W NL+  S  +R  L+         
Sbjct: 138 EAALTKENESYQRNAALAATIASWREQKTQDYSKTWANLVQGSQELRLALNTPERLFSVE 197

Query: 159 ---------GSQWYDEQWSHSELLLA-LEQLNTIQ--------HQLLSERPIASKPLVTQ 200
                     + +Y    S+ ELLL+ +   NT          ++  SER I S  L  Q
Sbjct: 198 NNKDALSSVNALYYINSLSNKELLLSDMYSSNTASSDTETEATNENNSERIIESSELEQQ 257

Query: 201 QEVLEKQRLLGHFKFSLDRASVWLKVVTQQLENNDDAIVCGPHRDNTKLNYLRNVFQSQY 260
            +++   RL      +    +  L ++T  LE   DA+ C   R + K   LRNVF   +
Sbjct: 258 LKIIRSARLPATLWHTQQTLTQNLSLLTDMLETELDAVSCPEGRASDKAKILRNVFYLFF 317

Query: 261 VEKIQPYLASLDRTYYQLS-------AQLGLFEQ--PHSPFPIQASHQTFRLATQQHAQY 311
           +E+IQP  + +++ +Y+L+       AQ  L E+   +     Q     +    + H   
Sbjct: 318 IEEIQPVGSLVNQYHYKLAPLWEDWLAQPSLHEEFKRYIRQQSQDGFNQYSSVMKAHVNL 377

Query: 312 WQRLFARCRIT 322
           WQ    RC ++
Sbjct: 378 WQGFLGRCNLS 388