Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., MATE family efflux transporter from Rhodanobacter sp000427505 FW510-R12

 Score =  305 bits (781), Expect = 2e-87
 Identities = 166/443 (37%), Positives = 255/443 (57%), Gaps = 10/443 (2%)

Query: 7   EASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGVGLLM 66
           E    ++LA P++ A +A  G   +D ++AG VSA  + AV++ ASIW  +I+ G+G++M
Sbjct: 14  EVRATVRLALPLIAAQLAAVGSNVIDAVLAGHVSAHVLGAVAVGASIWSLAIVCGIGMMM 73

Query: 67  ALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEAMATKT 126
           A+ P VAQL+GAGR+ ++     Q L LAL + V +   +   Q +I  + V  ++    
Sbjct: 74  AVPPSVAQLDGAGRRGEVGAVFQQALWLALGMGVLLWFAVRHAQPLIELIGVTPSLRHDV 133

Query: 127 VGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGAPE 186
             ++ A+ +  PA   + ALR  ++G+SLT+P+M     GL+L +PL ++ ++GK G P 
Sbjct: 134 QRFLLAISWGAPALTCYFALRGLSEGLSLTRPSMYFSLGGLVLLVPLGYVLMFGKLGIPP 193

Query: 187 LGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLGFPVAA 246
            G  GCGVATAIV W+ LL    Y++  +    + +F+ F  P  + +  L  +G P+A 
Sbjct: 194 QGAHGCGVATAIVLWLELLAFGVYVIFRRNYRGLGLFDRFEWPDRRRIGALVHIGLPMAV 253

Query: 247 ALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGEQD 306
            L  E  LF   AL++A LG  V+A+HQVA+N +SL FM P+ +  A+++RVG+ +G  D
Sbjct: 254 TLLAEAGLFVATALIIATLGEDVIASHQVAINIASLFFMIPLGLAMAITVRVGNAVGRGD 313

Query: 307 TKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAIYQCM 366
            +G   A   G+   L T   +A L +     IA LYT    V+ALA QL++ A ++Q  
Sbjct: 314 ERGVRYAGFCGIGLTLLTQLFSAALMLGLPHFIASLYTHEPKVIALAAQLIMLAGLFQFS 373

Query: 367 DAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLT-EQPLGAKGFWLGF 425
           D +QV A G+LRG KD       T  +YW++G+P G+      WL     +GA+G W+G 
Sbjct: 374 DGIQVAANGALRGLKDTRVPMAITLFAYWMIGMPVGW------WLAFHHGMGARGMWIGL 427

Query: 426 IIGLSAAALMLGQRLY---WLQK 445
           I GLSAAA ML  R +   W Q+
Sbjct: 428 IAGLSAAAAMLFTRFWRSAWRQR 450



 Score = 32.3 bits (72), Expect = 3e-05
 Identities = 32/181 (17%), Positives = 69/181 (38%), Gaps = 11/181 (6%)

Query: 5   KKEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGVGL 64
           ++    L+ +  P+ +  +A+ G+     ++   +    +A+  +A +I     +  +GL
Sbjct: 238 RRRIGALVHIGLPMAVTLLAEAGLFVATALIIATLGEDVIASHQVAINIASLFFMIPLGL 297

Query: 65  LMALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEAMAT 124
            MA+   V    G G +  + +    G+ L LL  +   A++      I  +   E    
Sbjct: 298 AMAITVRVGNAVGRGDERGVRYAGFCGIGLTLLTQLFSAALMLGLPHFIASLYTHEP--- 354

Query: 125 KTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGA 184
                   VI      ++   L  F+DG+ +     + G     + + +  +F Y   G 
Sbjct: 355 -------KVIALAAQLIMLAGLFQFSDGIQVAANGALRGLKDTRVPMAIT-LFAYWMIGM 406

Query: 185 P 185
           P
Sbjct: 407 P 407