Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 467 a.a., multidrug transporter from Pseudomonas simiae WCS417

 Score =  200 bits (509), Expect = 7e-56
 Identities = 137/441 (31%), Positives = 218/441 (49%), Gaps = 12/441 (2%)

Query: 2   HRYKKEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFG 61
           H  + E   +++L+ P++ + +A   M   DT+M   +S   +A   + A+ +    +F 
Sbjct: 5   HPARTELWAILRLSGPLIASQLAHMLMVLTDTLMMARLSPEALAGGGLGAASYSFVSIFC 64

Query: 62  VGLLMALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEA 121
           +G++ A+  +VA  +GAG           GL LA L+++    +L+  + ++      E 
Sbjct: 65  IGVIAAVGTLVAIRHGAGDIEGATRLTQAGLWLAWLMALAAGLLLWNLKPLLLLFGQTET 124

Query: 122 MATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGK 181
                  ++  + FA+P +L F ALR FT  +   +P MVI   G + N  LN   + G 
Sbjct: 125 NVHSAGQFLTILPFALPGFLSFMALRGFTSAIGKAQPVMVISLGGAVANYLLNHALIEGM 184

Query: 182 FGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLG 241
           FG P+LG +G G+ TA+V   M L L++YI  ++  A   +     +   + L  L+RLG
Sbjct: 185 FGLPKLGLMGIGLVTAVVANGMALALMWYIHRNRTYAAYPLSTGLLRLNTQYLRELWRLG 244

Query: 242 FPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHK 301
            P+      EV LFA  AL +  +GST +AAHQ+AL   S+ FM P  +  AV++R+G  
Sbjct: 245 LPIGGTYAVEVGLFAFAALCMGTMGSTQLAAHQIALQIVSVAFMVPAGMSYAVTMRIGQH 304

Query: 302 LGEQDTKGAAIAANVGLMTGLATACITALLTVLFREQ-IALLYTENQV----VVALAMQL 356
            G      A +A  VG+  G A     A +  L+ +  I LL   N      V+ LA+ L
Sbjct: 305 YGAGQLLQARLAGRVGIGFGAAVMLGFAAVLWLYSDPLIGLLIDHNDPAFHDVIVLAVSL 364

Query: 357 LLFAAIYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMT-NWLTEQP 415
           L  AA ++  D VQ +A G +RG KD    F      YW++G P+ +++  T  W     
Sbjct: 365 LAVAAWFELFDGVQTIAMGCIRGLKDAKTTFLIGAGCYWLIGAPSAWLMAFTLGW----- 419

Query: 416 LGAKGFWLGFIIGLSAAALML 436
            G  G W G  +GL+ AA+ L
Sbjct: 420 -GPTGVWWGLALGLACAAVSL 439