Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., multidrug transporter from Pseudomonas simiae WCS417

 Score =  387 bits (995), Expect = e-112
 Identities = 202/438 (46%), Positives = 280/438 (63%), Gaps = 1/438 (0%)

Query: 3   RYKKEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGV 62
           R  +E   L+ LA P++I  +A T M FVD +MAG VS  D+AAV +  SIW+P  L   
Sbjct: 13  RISREVRGLLTLALPIMIGQLATTAMSFVDAVMAGRVSPQDLAAVGLGNSIWIPVYLLMT 72

Query: 63  GLLMALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEAM 122
           G L+A  P VAQ  GAG+  +I   V Q L LA++V +    +L   + I+  M+VE  +
Sbjct: 73  GTLLATTPKVAQRYGAGQFSEIGPLVRQSLWLAVVVGITASLLLLCAEPILHVMNVEPDL 132

Query: 123 ATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKF 182
              ++GY+H +   +PA  L+  LR F+DG+  T+P+MV+G  GL LNIPLN+IF+YG  
Sbjct: 133 IEPSMGYLHGIAAGMPAIALYYVLRCFSDGLGRTRPSMVMGLCGLALNIPLNYIFIYGHL 192

Query: 183 GAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLGF 242
           G P +GGVGCG ATAI  W+M+L L  +          ++++ F  PQ   + R+  +G 
Sbjct: 193 GVPAMGGVGCGWATAIAMWVMMLGLAVWTRWGPAYQSSELYKRFDWPQWAVIKRVLSIGL 252

Query: 243 PVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKL 302
           P+  A+F E ++FAV+ALL+  LG+TVV+ HQ+ALN SSLVFM P S+  AV++RVG  L
Sbjct: 253 PIGIAIFAESSIFAVIALLIGSLGATVVSGHQIALNVSSLVFMIPYSLSMAVTVRVGQAL 312

Query: 303 GEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAI 362
           G  + + A  AA VG+ T LA AC++  L +LFREQIA +YT + VV+ LA  L++F+A+
Sbjct: 313 GRGEPREARFAAGVGMGTALAYACLSCSLMLLFREQIAAIYTPDPVVIHLASMLIVFSAL 372

Query: 363 YQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKGFW 422
           +Q  D++QV AAG+LRGY+D       T  +YW +GLP GY LG+TNWL E P G  G W
Sbjct: 373 FQFSDSIQVTAAGALRGYQDTRVTMVLTLFAYWGVGLPVGYALGLTNWLGE-PSGPSGLW 431

Query: 423 LGFIIGLSAAALMLGQRL 440
            G I+GLS AA ML  RL
Sbjct: 432 QGLIVGLSCAAGMLLVRL 449