Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., MATE family efflux transporter from Variovorax sp. OAS795

 Score =  208 bits (529), Expect = 3e-58
 Identities = 140/447 (31%), Positives = 223/447 (49%), Gaps = 11/447 (2%)

Query: 7   EASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGVGLLM 66
           E   + + A  VL+  +A    G  DTI+AG  +   +AA+S+ A+I++   +  +G+L 
Sbjct: 4   ERGLIARHAGTVLVGQLAVMAFGVTDTIVAGRYAESALAALSVGAAIFISVFVSLMGVLQ 63

Query: 67  ALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEAMATKT 126
           AL+PV A+L+GA R+ ++   V Q L L+ +     +AVL     ++R+  V   M    
Sbjct: 64  ALLPVWAELHGADRRSEVGRSVRQSLYLSGITIAIGMAVLLFPGAVLRWTQVPPDMRAGV 123

Query: 127 VGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGAPE 186
             Y+  + FA+P  LLF+   +   G+   +    +    L + +PL+  F +G  G P 
Sbjct: 124 EAYLAVLAFALPPALLFRLFSTLNQGLGKPQVVTSLQLGSLAVKLPLSIWFTFGGAGLPA 183

Query: 187 LGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLGFPVAA 246
           +G VGC  AT  V W ML   ++ + +S      +++E    P  +++ +   LG P   
Sbjct: 184 MGLVGCAWATLCVNWTMLACAVWLLRSSAFYRDYRLWERIEAPDWRQIRQFASLGIPGGL 243

Query: 247 ALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGEQD 306
           A+  EVT F ++AL +A LG+   AAHQ+A N  ++ +M P+S+G A S RV   LG   
Sbjct: 244 AVLVEVTSFTLMALFIARLGTAAAAAHQIASNLLAVAYMVPLSLGIATSARVSFWLGAGQ 303

Query: 307 TKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAIYQCM 366
              A  A  +G       A   A   V  R Q+A +Y++N  V+ALA  LLL  A+Y   
Sbjct: 304 AAKARRACRMGFELTALCALFFAGALVALRFQLAHVYSDNPAVIALAAALLLVVAVYHLA 363

Query: 367 DAVQVVAAGSLRGYKD--MTAIFHRTFISYWVLGLPTGYIL---GMTNW-LTEQPLGAKG 420
           DA+Q +    LR Y+   +  + + T +  W  GL   Y+L   G+  W   + PL    
Sbjct: 364 DALQTLCVFVLRCYRVTLVPLVIYCTLL--WGFGLGGSYLLAYRGLGPWPAMQSPL---A 418

Query: 421 FWLGFIIGLSAAALMLGQRLYWLQKQS 447
           FWL     L+  AL+ G  L W  ++S
Sbjct: 419 FWLMSTGALAVTALLFGALLRWTMRRS 445