Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 79.7 bits (195), Expect = 2e-19
 Identities = 82/419 (19%), Positives = 165/419 (39%), Gaps = 12/419 (2%)

Query: 11  LIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGVGLLMALVP 70
           L ++  P++   VA      VDT     +    +AA+S    +        +G+ + L  
Sbjct: 28  LRQMTVPMIFGLVAILMFNLVDTFFISLLGTQALAAISYTFPVTFAVNCITMGIGVGLST 87

Query: 71  VVAQLNGAGRQHKIPFEVHQGLILALL-VSVPIIAVLFQTQFIIRFMDVEEAMATKTVGY 129
            + +L G G   +       GL+LALL V+      L   + +   +     +      Y
Sbjct: 88  CIGRLLGQGDGRQAARVSSHGLLLALLLVAAASTLGLLTIEPLFLLLGASHELIPLIKEY 147

Query: 130 MHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGAPELGG 189
           M      +P  +L  A  S       TK    I  +  L+N  L+ + ++G    PELG 
Sbjct: 148 MVVWYLTIPLLVLPMAGNSAIRATGDTKTPAKIMMLAGLINGALDPLLIFGYGPFPELGI 207

Query: 190 VGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLGFPVAAALF 249
            G  +A+A  +   L+  L+ ++  ++L  +            +  ++ ++G P A +  
Sbjct: 208 QGAAIASAFSWLGALIGSLYLLIKREKLLAIPSLPHLRD----DWQQILKIGTPAALSTA 263

Query: 250 FEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGEQDTKG 309
                 A++ ++++  G+  VAA+       S++ +  MS+ +A++  +   LG Q+   
Sbjct: 264 MNPISGALLMIMLSSHGTAAVAAYGATQRIESILILVLMSLTSALTPFMAQNLGAQNPAR 323

Query: 310 AAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAIYQCMDAV 369
           +     + L   L    +  ++ V     +A L+++ Q V  L    LL   +      V
Sbjct: 324 SFAGLFLSLRFSLLFQLMVFIMMVPLSIPLAALFSQEQAVRDLLWHYLLVVPVSYGFQGV 383

Query: 370 QVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKGFWLGFIIG 428
            ++   +L         F  +F+  +V  LP         W+  +    +G ++G  +G
Sbjct: 384 VMMLVSALNALHQPLKAFQWSFMRLFVFTLPAA-------WIGGRLYNIEGLFIGIAVG 435