Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., Multi antimicrobial extrusion protein MatE from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  191 bits (486), Expect = 3e-53
 Identities = 131/446 (29%), Positives = 206/446 (46%), Gaps = 10/446 (2%)

Query: 2   HRYKKEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFG 61
           H   KE   +++LA P++ + +A   M F DT+M G +    +A   + A+ +     F 
Sbjct: 3   HSALKELWIILRLAGPLIASQMAHMLMVFTDTVMMGKIGPEALAGGGLGAATYSFVSFFC 62

Query: 62  VGLLMALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEA 121
           VG++ A+  +V+  +GAG           GL LA  +++    +L+  + I+      EA
Sbjct: 63  VGVMAAVGTLVSIRHGAGDTEGATRLTQAGLWLAWGMALVAALLLWNLEPILLQFGQAEA 122

Query: 122 MATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGK 181
                  ++  + FA+P  L F ALR FT  +    P M I   G   N  LN+  ++  
Sbjct: 123 NVHMAAQFLITLPFALPGLLSFMALRGFTSALGRAGPVMTISLAGAAANFVLNYALIHQW 182

Query: 182 FGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLG 241
            G P LG +G G+ TAIV   M L L  +I      A   + +   K     L  L+RLG
Sbjct: 183 LGLPNLGLMGIGLVTAIVTNCMALALALHIRLHPAYAAYPIRKGLSKLSRSHLGELWRLG 242

Query: 242 FPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHK 301
            P+      EV LF   A  +  +GST +AAHQ+AL   S+ FM P+ +  AV++R+G  
Sbjct: 243 LPIGGTYAVEVGLFTFAAFCMGAMGSTQMAAHQIALQTVSMAFMVPVGMSYAVTMRIGQH 302

Query: 302 LGEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQ-----VVVALAMQL 356
            G  +     +A  +G+  G     +  LL  L    +  L+ +        +V LA +L
Sbjct: 303 YGAGNLLMVRMAGRLGIGFGGCVMLMFGLLFWLAPHLVIGLFLDINDPAFAEIVVLATKL 362

Query: 357 LLFAAIYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPL 416
           L  AA+++  D  Q +A G++RG KD    F      YW++  P  ++LG +        
Sbjct: 363 LAIAALFEFFDGTQTIAMGAIRGLKDARTTFLIGLGCYWLIAAPAAWLLGFST-----DA 417

Query: 417 GAKGFWLGFIIGLSAAALMLGQRLYW 442
           GA G W G  +GL  +A+ L     W
Sbjct: 418 GASGVWWGLALGLFCSAVALTYAFEW 443