Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., Na+-driven multidrug efflux pump from Sphingobium sp. HT1-2

 Score = 90.1 bits (222), Expect = 1e-22
 Identities = 97/441 (21%), Positives = 181/441 (41%), Gaps = 16/441 (3%)

Query: 8   ASNLIKLATPVLIASVAQTGMGFVDTIMAG---GVSAIDMAAVSIAASIWLPSILFGVGL 64
           AS L+  A P L +++ Q+  G ++ I  G   G  A+   A +      + S++FG G 
Sbjct: 17  ASTLLTFAIPTLASNILQSLNGSINAIWVGRFLGPQALAATANANIIMFLMFSVVFGFG- 75

Query: 65  LMALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPI-IAVLFQTQFIIRFMDVEEAMA 123
            MA   ++AQ  GA             +    L+++ + +A  F    ++  +       
Sbjct: 76  -MASTVMIAQAVGARDMDAARRAFGSAVGFCFLLAMGVAVAGWFGGPALLHLLATPPEAF 134

Query: 124 TKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFG 183
              + Y+  +  A+PA LL   +     G    +  ++   + + +++ LN + + G   
Sbjct: 135 DMALTYLRVIFVAMPASLLSVMMMMGLRGTGDARTPLIFMILSVAIDLVLNPVLILGLGP 194

Query: 184 APELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFET-FHKPQPKELIRLFRLGF 242
            P +G  G   ATA   ++ L+ L+ Y         ++  E  + +P   E+  L   G 
Sbjct: 195 IPAMGIGGSAAATAAAGFVSLIALVIYTYAKDLPLRLRGAELGYLRPAMDEMRVLSTKGL 254

Query: 243 PVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKL 302
           P+   +    T   V+  LV   G  V AA+  A    + + M  M++GAAVS      +
Sbjct: 255 PMGLQMIVMSTSGLVMIGLVNREGFLVTAAYGAAQQIWTYLQMPAMAMGAAVSAMAAQNI 314

Query: 303 GEQDTKGAAIAANVGLMTGLATACITALLTVLFREQ-IALLYTENQVVVALAMQLLLFAA 361
           G       +     G+   LA      ++ ++F E  +AL  + NQ V+  A  + L A+
Sbjct: 315 GAGRWDRISRITGYGISYLLAITGAMVVVILIFHEALLALFLSHNQAVIDAAWNMQLLAS 374

Query: 362 IYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKGF 421
               +    ++  G +R   +   +     + + +  +  G+      +L    +GA   
Sbjct: 375 WSFMLFGCTMILFGVMRA--NGVVVAPLLILVFTLFAVRLGFY-----YLAYPRIGADAL 427

Query: 422 WLGFIIGLSAAALMLGQRLYW 442
           WL F +G SA +L L   +YW
Sbjct: 428 WLSFPVG-SAVSLTLAALVYW 447