Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score =  206 bits (523), Expect = 2e-57
 Identities = 130/442 (29%), Positives = 214/442 (48%), Gaps = 16/442 (3%)

Query: 4   YKKEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGVG 63
           ++ EA  L+ LA P++  +VA +G+   D ++ G + A  +AA ++A +++   ++FG+G
Sbjct: 7   WRIEARALVTLAIPMIAGNVAWSGIAATDLLLVGRLGAEAVAAGALAINLFNALLIFGLG 66

Query: 64  LLMALVPVVAQLNGAGRQ--HKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEA 121
           L+ A  P++A   G  R     +   VHQ L  A    +P   +L+  + I+R M  E  
Sbjct: 67  LVTAAAPLIASERGRRRHSVRDVRRTVHQTLRAAAFFVLPAWLILWHCEAILRAMGQEPD 126

Query: 122 MATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGK 181
           +A +    M  + +A+  +L F  LR+F   +      ++I  + +  N+ + W  ++G 
Sbjct: 127 LAREAGHLMRGMQWALLPFLCFTTLRNFISALERPLWGLIIMLLAIPFNVLVGWALIFGH 186

Query: 182 FGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLG 241
            G P LG +G G+A+ +    + L LL  I+  +R    ++   F          ++ LG
Sbjct: 187 LGLPALGLLGAGIASTLSSTFLFLGLLTVILVDRRFRRYRLMGRFWTRDRDRQRAVWTLG 246

Query: 242 FPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHK 301
            P+A  L  EVT+F   A L+  +    +AAH VA+  +SLVFM PM IG A ++RVG  
Sbjct: 247 LPIAITLGLEVTVFNASAFLMGLIDRESLAAHAVAIQIASLVFMVPMGIGQAATVRVGVA 306

Query: 302 LGEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTE-----NQVVVALAMQL 356
            G  D      A  + L+ G   A   AL+ VL    +  ++ +     N     LA+  
Sbjct: 307 YGRADPAAIGRAGWLALIVGTGFAMAAALMLVLIPRPLVSIFLDVHDPANLATANLAVSF 366

Query: 357 LLFAAIYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPL 416
           L  AA++Q +DA Q V AG LRG +D           YW++G+  G +L         P+
Sbjct: 367 LAVAALFQLVDAAQAVGAGVLRGIQDTKVPMIFALFGYWIIGIGVGALLAF-------PM 419

Query: 417 G--AKGFWLGFIIGLSAAALML 436
           G    G W G   GL   A++L
Sbjct: 420 GLHGVGIWFGLAAGLGTVAILL 441



 Score = 27.7 bits (60), Expect = 8e-04
 Identities = 21/81 (25%), Positives = 35/81 (43%)

Query: 225 TFHKPQPKELIRLFRLGFPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVF 284
           T   P   E   L  L  P+ A       + A   LLV  LG+  VAA  +A+N  + + 
Sbjct: 2   TQSSPWRIEARALVTLAIPMIAGNVAWSGIAATDLLLVGRLGAEAVAAGALAINLFNALL 61

Query: 285 MFPMSIGAAVSIRVGHKLGEQ 305
           +F + +  A +  +  + G +
Sbjct: 62  IFGLGLVTAAAPLIASERGRR 82