Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 458 a.a., MATE family efflux transporter from Serratia liquefaciens MT49

 Score =  494 bits (1273), Expect = e-144
 Identities = 251/448 (56%), Positives = 329/448 (73%), Gaps = 3/448 (0%)

Query: 1   MHRYKKEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILF 60
           M +Y  EA +L+ LA PV+IA ++QT MG VDTIMAG  SA DMAAV++  SIWLP+ILF
Sbjct: 1   MQKYFIEARSLLALAIPVIIAQISQTAMGVVDTIMAGAYSATDMAAVAVGTSIWLPAILF 60

Query: 61  GVGLLMALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFM-DVE 119
           G GLL+AL PV+AQLNGAGR+ +I  +V QG  LA  VS+ +I VL+ ++F+I  M +++
Sbjct: 61  GHGLLLALTPVIAQLNGAGRRDRIAHQVRQGFWLAGAVSLLVIIVLYNSKFVIDLMHNID 120

Query: 120 EAMATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVY 179
             +A K VGY+HA+++  P YL FQ LR   +G+S TKP MVIGF+GLL+NIP+N+IF+Y
Sbjct: 121 PQLADKAVGYLHAIMWGAPGYLFFQVLRGQCEGLSKTKPGMVIGFLGLLVNIPINYIFIY 180

Query: 180 GKFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFE-TFHKPQPKELIRLF 238
           GKFG PELGGVGCGVAT  VYW M L + +Y+  +     +   E +  +P    + RLF
Sbjct: 181 GKFGMPELGGVGCGVATGSVYWFMFLAMRWYVKRAPSQRDILPHEGSSPRPDWPAIRRLF 240

Query: 239 RLGFPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRV 298
            +G PVA ALFFEVTLFAVVALLV+PLG   VA HQ+ALNFS+L+F+ PMS+G + +IRV
Sbjct: 241 GIGLPVALALFFEVTLFAVVALLVSPLGIVSVAGHQIALNFSALMFVLPMSLGVSATIRV 300

Query: 299 GHKLGEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLL 358
           G++LGE   +GA IAA   +  G+  AC TAL T  FREQIALLY ++  VVA+A QL+L
Sbjct: 301 GYRLGEGSVEGARIAAYSAIGVGILMACCTALFTATFREQIALLYNDSPAVVAMASQLML 360

Query: 359 FAAIYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGA 418
            AAIYQ  D++QV+ +G LRGYKD  +IF  TFI+YWVLGLP+GY+L +T+ +    +G 
Sbjct: 361 LAAIYQISDSIQVIGSGVLRGYKDTRSIFFITFIAYWVLGLPSGYLLALTD-IVVPAMGP 419

Query: 419 KGFWLGFIIGLSAAALMLGQRLYWLQKQ 446
            GFW+GFIIGL+ AA+M+  R+ WLQKQ
Sbjct: 420 SGFWIGFIIGLTFAAIMMALRMRWLQKQ 447