Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., putative efflux protein, MATE family from Kangiella aquimarina DSM 16071

 Score =  119 bits (299), Expect = 2e-31
 Identities = 99/447 (22%), Positives = 200/447 (44%), Gaps = 23/447 (5%)

Query: 5   KKEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGVGL 64
           K  +  +++++ P++   ++Q  +  VD  M G   +  +AA+ IA  I   ++ F +G 
Sbjct: 4   KDRSQQVLQISLPIVGGMISQNVLNLVDAAMVGTQGSAAIAAIGIAGFINFMAVAFFIGF 63

Query: 65  LMALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPI-IAVLFQTQFIIRFMDVEEAMA 123
              +  +V++  G GRQ +  + ++  L++  L+++P  I + F    I+  ++ +  + 
Sbjct: 64  AAGVQAMVSRRMGEGRQSEAAYPLNAALLIIGLMALPTSIILFFLAPDILSSLNSDPELL 123

Query: 124 TKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFG 183
            + + Y+ A    + A  L  + RS+   +  T   +    +   LNI LN+  ++G FG
Sbjct: 124 EEGIPYLQARFAGILAIGLNFSYRSYWSAIKQTGYYLRTLLVMHSLNILLNYTLIFGNFG 183

Query: 184 APELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIR-LFRLGF 242
            PELG +G G+ T+I   + +  + ++I+ +K   H K F    +      I+ +FR+  
Sbjct: 184 MPELGTLGAGIGTSIS--LAMGSIYYHILATK---HTKQFGYMERLAALATIKSIFRISL 238

Query: 243 PVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKL 302
           P +    F    F  +  ++  +G+  +AA     N   +  +  +++G   +  VG  L
Sbjct: 239 PSSIQQLFFAGGFTALFWIIGQVGTHQLAAANAITNVMLVAILPCIALGIGAATMVGQAL 298

Query: 303 GEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAI 362
           G+QD   A +         L  A   A L  +F + I  ++ +    + +A      +A 
Sbjct: 299 GKQDPNDAYLWGWDVAKMALIFATALATLFFIFTDPIMGIFLKEPTALQIAHWPFKLSAG 358

Query: 363 YQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILG-------MTNWLTEQP 415
              +DA+ +V   +L G        + + +S W++ LP  ++LG       MT WL    
Sbjct: 359 IIIIDAMGLVFLNALNGAGYTKPPMYVSLLSQWLIFLPVAWLLGPYFGFGLMTIWLA--- 415

Query: 416 LGAKGFWLGFIIGLSAAALMLGQRLYW 442
                 +  + +  + A + L QR  W
Sbjct: 416 ------YAAYRVLQTGAFIWLWQRRTW 436