Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 458 a.a., putative efflux protein, MATE family from Kangiella aquimarina DSM 16071

 Score = 68.9 bits (167), Expect = 3e-16
 Identities = 111/445 (24%), Positives = 187/445 (42%), Gaps = 51/445 (11%)

Query: 9   SNLIKLATPVLIASVAQTGMGFVDTIMAGGV-SAIDMAAVSIAASIWLPSILFGVGLL-M 66
           S + ++A P+L++++    +G VD+ + G +     +AAV + A+++   I++ +G L M
Sbjct: 20  SAIWRIALPMLLSNMTVPLVGLVDSAVMGHLPEPFYLAAVGLGAALFT-FIVWTMGFLRM 78

Query: 67  ALVPVVAQLNGAGRQHKIPFEVHQGLILALLV--SVPIIAVLFQT---QFIIRFMDVEEA 121
               +VAQ  GA   H     + Q L L+ L+  SV  + +L        I+ +++  + 
Sbjct: 79  ITTGLVAQAYGA-EDH---VAIRQWLWLSSLLGLSVAFLTLLLNPWLIDLILWWIEGSDE 134

Query: 122 MATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGK 181
           + +  + Y +  I+ +P  LL   +  +  GM   +    +  I  LLN+ L+  FV G 
Sbjct: 135 VESSVLAYWNTRIWGLPFSLLNAVMIGWFLGMQTARIPFWMLLIINLLNVVLDLYFVLG- 193

Query: 182 FGAPELGGVGCGVATAIV-----------YWIMLLLLLFYIVTSKRLAHVKVFETFHKPQ 230
                LG    GVA A V           Y ++ LL  + I    +LA       +HK  
Sbjct: 194 -----LGMTVEGVALASVIAEVIGCAFGGYHVIRLLAKYPIAEKFKLA-------WHK-- 239

Query: 231 PKELIRLFRL-GFPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMS 289
              L RL  L G  +   L  E+  F + A   A LG  V+A + + LNF  L+      
Sbjct: 240 ---LKRLLGLNGDLLIRTLALELVFFTIHA-RGAELGDEVMAINVILLNFLLLIANGLDG 295

Query: 290 IGAAVSIRVGHKLGEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVV 349
              AV   VG  +G    +    + NVG +  L  + I AL+  LF E+   L T    V
Sbjct: 296 FANAVEALVGKAIGRNSWRDFRSSINVGGLWSLLVSIIFALIFWLFIEEFIGLITSIDSV 355

Query: 350 VALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTN 409
           +A +    L+      +        G   G   + A+ +   I+  +  +P  ++     
Sbjct: 356 IAASEPYHLYIIFMALVSVWSFWLDGVFIGASQIGAMRNSMLIAVLLGFVPLYFV----- 410

Query: 410 WLTEQPLGAKGFWLGFIIGLSAAAL 434
               + LG  G WL F   +   AL
Sbjct: 411 ---TKSLGNHGLWLAFYAFMLLRAL 432



 Score = 24.3 bits (51), Expect = 0.009
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 15/69 (21%)

Query: 402 GYILGMTNWLTEQPLGAKG-------FWLGFIIGLSAAAL-------MLGQRLYWLQKQS 447
           G++  +T  L  Q  GA+         WL  ++GLS A L       ++   L+W++  S
Sbjct: 74  GFLRMITTGLVAQAYGAEDHVAIRQWLWLSSLLGLSVAFLTLLLNPWLIDLILWWIE-GS 132

Query: 448 DDVQLHLAA 456
           D+V+  + A
Sbjct: 133 DEVESSVLA 141