Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., MATE family efflux transporter from Erwinia tracheiphila SCR3

 Score =  473 bits (1217), Expect = e-138
 Identities = 237/445 (53%), Positives = 320/445 (71%), Gaps = 2/445 (0%)

Query: 1   MHRYKKEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILF 60
           M +Y  EA  L+ LA P+++A VAQT MGFVDT+MAG VSA DMAAV++  SIWLP+IL 
Sbjct: 1   MQKYLTEARQLLALAIPIILAQVAQTAMGFVDTVMAGAVSATDMAAVAVGTSIWLPAILL 60

Query: 61  GVGLLMALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFM-DVE 119
           G GLL+AL PV+AQ NG+GR+  I + + Q   LAL  ++ I+ VL+   FIIR M +++
Sbjct: 61  GHGLLIALTPVIAQYNGSGRRDHIAYRIRQAYWLALFSALLIMIVLYNAGFIIRAMHNID 120

Query: 120 EAMATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVY 179
             +A K VGY+ A+++  P YL FQ +R   DG+S T+P MV+GFIGLL+NIP+N+IF+Y
Sbjct: 121 PRLADKAVGYLRALLWGAPGYLCFQVVRCQCDGLSKTRPGMVMGFIGLLVNIPVNYIFIY 180

Query: 180 GKFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFR 239
           G FG P LGGVGCGVATA VYWIM +++  ++  +  +  +++   F  P  K L RL +
Sbjct: 181 GHFGMPALGGVGCGVATASVYWIMFIVMKCWVSRAASMRDIRLTNRFSLPDGKVLWRLLQ 240

Query: 240 LGFPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVG 299
           LG PVA A FFEVTLFAVVALLV+P+G   VA HQ+ALNFSSLVF+ P+S+G A +IR+G
Sbjct: 241 LGLPVALAWFFEVTLFAVVALLVSPMGIVEVAGHQIALNFSSLVFVLPLSLGVATTIRIG 300

Query: 300 HKLGEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLF 359
            +LGE    GA +AA      G+A A +TALLT++FRE IALLY  +  V+ LA QL+L 
Sbjct: 301 FRLGEGSVDGAQVAAWSAQGVGMAVALLTALLTIIFREPIALLYNNDPAVITLAAQLMLL 360

Query: 360 AAIYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAK 419
           AA+YQ  D+VQV+ +G LRGY++  +IF  TFI+YW+LGLP GY+L  T+W+    +G  
Sbjct: 361 AALYQFSDSVQVIGSGILRGYRETRSIFFITFIAYWLLGLPAGYLLAKTDWIV-PAMGPA 419

Query: 420 GFWLGFIIGLSAAALMLGQRLYWLQ 444
           GFW+GFIIGL+++ALM+  R+  +Q
Sbjct: 420 GFWIGFIIGLTSSALMMVWRIKHIQ 444