Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., putative efflux protein, MATE family from Enterobacter asburiae PDN3

 Score = 88.2 bits (217), Expect = 6e-22
 Identities = 104/441 (23%), Positives = 178/441 (40%), Gaps = 29/441 (6%)

Query: 14  LATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGVGLLMALVPVVA 73
           LA P+ + +     MG + T +   +    MA V +A S  +  I F   + +    VVA
Sbjct: 97  LAVPIFLENTCVLLMGVLSTFLVSWLGKEAMAGVGLADSFNMVVISFFAAIDLGTTVVVA 156

Query: 74  QLNGAGRQHKIPFEVHQGLILALLVSVPIIAVL-FQTQFIIRFMDVEEAMATKTVG--YM 130
              G     +      Q L++  + S+ + AV+ +  + II F+  E     K +   Y+
Sbjct: 157 FSLGKLDPKRAREAARQSLMIMTIFSIVLAAVIHYFGREIIDFVAGEATNEVKDLALTYL 216

Query: 131 HAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGAPELGGV 190
              + + PA  +         G   TK  ++I     +LNI ++ + +YG F    LG V
Sbjct: 217 EMTVLSYPAAAIALIGSGALRGAGNTKIPLLINGGMNILNIIISSVLIYGVFSWEGLGFV 276

Query: 191 GCGVATAIVYWI----MLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLGFPVAA 246
           G G+   I  +I    ++ +L+  I  S RL     F  F+     E++ +   G P + 
Sbjct: 277 GAGLGLTISRYIGAVAIIGVLMAGITPSLRLTLKSYFRPFNFAIIWEVMGI---GIPAS- 332

Query: 247 ALFFEVTLF----AVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKL 302
               E  LF     +  + VA +G+ V+A + +A + +SL+ +   ++G+A +I  G +L
Sbjct: 333 ---IESVLFNGGKLLTQMFVAGMGTDVIAGNFIAFSIASLINLPGNALGSASTIITGKRL 389

Query: 303 GEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAI 362
           G+     A                + A  T  F   +A  YT    V  +   L+   A 
Sbjct: 390 GKGQIGQAERQLRHVFWLSTIGLTLIAWGTAPFAGLMASFYTHEDDVKEVVKILIWLNAA 449

Query: 363 YQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILG-MTNWLTEQPLGAKGF 421
           +  + A   V    L+G +D       + +  W   +  GY LG M  W      G  G 
Sbjct: 450 FMPIWAASWVLPAGLKGARDARFAMWVSMLGMWGCRVVAGYTLGVMLGW------GVVGV 503

Query: 422 WLGFIIGLSAAALMLGQRLYW 442
           WLG  +  +    + G   YW
Sbjct: 504 WLGMFLDWA----VRGALFYW 520