Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 484 a.a., toxic metabolite efflux MATE transporter YeeO from Escherichia coli ECRC62

 Score =  104 bits (259), Expect = 7e-27
 Identities = 101/442 (22%), Positives = 192/442 (43%), Gaps = 18/442 (4%)

Query: 14  LATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGVGLLMALVPVVA 73
           LA P+ + +     MG + T +   +    MA V +A S  +  + F   + +    VVA
Sbjct: 34  LAVPIFMENACVLLMGVLSTFLVSWLGKDAMAGVGLADSFNMVIMAFFAAIDLGTTVVVA 93

Query: 74  QLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQT-QFIIRFMDVEEAMATKTVG--YM 130
              G   + +      Q L++  L +V +  ++    + II F+  +     K +   Y+
Sbjct: 94  FSLGKRDRRRARVATRQSLVIMTLFAVLLATLIHHFGEQIIDFVAGDATTEVKALALTYL 153

Query: 131 HAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGAPELGGV 190
              + + PA  +         G   TK  ++I     +LNI ++ I +YG F  P LG V
Sbjct: 154 ELTVLSYPAAAITLIGSGALRGAGNTKIPLLINGSLNILNIIISGILIYGLFSWPGLGFV 213

Query: 191 GCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELI-RLFRLGFPVAAALF 249
           G G+   I  +I  + +L+ +      A     +++ KP    +I  +  +G P +    
Sbjct: 214 GAGLGLTISRYIGAVAILWVLAIGFNPALRISLKSYFKPLNFSIIWEVMGIGIPASVESV 273

Query: 250 FEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGEQDTKG 309
              +   +  + VA +G++V+A + +A + ++L+ +   ++G+A +I  G +LG      
Sbjct: 274 LFTSGRLLTQMFVAGMGTSVIAGNFIAFSIAALINLPGSALGSASTIITGRRLGVGQIAQ 333

Query: 310 AAIAANVGLMTGLATACITAL--LTVLFREQIALLYTENQVVVALAMQLLLFAAIYQCMD 367
           A I   +  +  L+T  +TA+  LT  F   +A  YT++  V  + + L+   A++  + 
Sbjct: 334 AEI--QLRHVFWLSTLGLTAIAWLTAPFAGVMASFYTQDPQVKHVVVILIWLNALFMPIW 391

Query: 368 AVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILG-MTNWLTEQPLGAKGFWLGFI 426
           +   V     +G +D       + +S W   +  GY+LG M  W      G  G W+G  
Sbjct: 392 SASWVLPAGFKGARDARYAMWVSMLSMWGCRVVVGYVLGIMLGW------GVVGVWMGMF 445

Query: 427 IGLSAAALMLGQRLY---WLQK 445
              +  A++   R+    WL K
Sbjct: 446 ADWAVRAVLFYWRMVTGRWLWK 467