Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 478 a.a., EmmdR/YeeO family multidrug/toxin efflux MATE transporter from Dickeya dianthicola ME23

 Score =  104 bits (259), Expect = 7e-27
 Identities = 106/443 (23%), Positives = 189/443 (42%), Gaps = 38/443 (8%)

Query: 4   YKKEASNLI-------KLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLP 56
           YKK  SN +        LA P+ I  +    MG   T +   +    MAAV +A S  + 
Sbjct: 19  YKKRHSNRVLFWREITPLAVPIFIEGLCVVLMGIFSTFLVSWLGKEAMAAVGLADSFNML 78

Query: 57  SILFGVGLLMALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVL-FQTQFIIRF 115
            I F   + +    VVA   G   + +      Q + L +L+S+ ++ ++ F  Q II  
Sbjct: 79  IIAFFTAVALGTAVVVAFSLGQRNRKQARQAARQSISLLVLISLLLVGLVEFAGQTIIDL 138

Query: 116 M--DVEEAMATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPL 173
           +  + E A+ +  + ++   ++  PA  +         G   T+  M+I     +LNI L
Sbjct: 139 IAYNAEPAVKSLALTFLRLTVWGYPALAITLVGCGALRGAGNTRLPMIINIGMNILNILL 198

Query: 174 NWIFVYGKFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKE 233
           + + +YG      +G +G G+   +  ++  L ++  +      A    F ++  P    
Sbjct: 199 SGVLIYGVASWQGVGFIGAGLGITLSRYLGALCVVLALTKGFNGALRIPFHSYFAPFTTT 258

Query: 234 LI-RLFRLGFPVAAALFFEVTLFAVVALL----VAPLGSTVVAAHQVALNFSSLVFMFPM 288
           ++  +  +G P +     E  +F V  L+    VA +G+ V+A + +A +  +L+ +   
Sbjct: 259 ILYEVLSIGIPAS----IESVMFNVGKLITQRFVAGMGTEVIAGNFIAFSIVALINLPGN 314

Query: 289 SIGAAVSIRVGHKLG-------EQDTKGAAIAANVGLMTGLATACITALLTVLFREQIAL 341
           ++G+  +I VG +LG       E+  K     +NVGL       C  ALL+V     +A 
Sbjct: 315 ALGSTSTIIVGSRLGKGQRMQSERQLKYIFWLSNVGL-------CALALLSVPTAGLMAS 367

Query: 342 LYTENQVVVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPT 401
           +YT    V+ +  QL+   A++  + A   V    L+G KD +          W   +  
Sbjct: 368 MYTNEPDVITVVKQLIWLNALFMPIWAASWVLPAGLKGAKDASYTMWVALAGMWGCRVIA 427

Query: 402 GYILGMTNWLTEQPLGAKGFWLG 424
           GYILG+         G  G W+G
Sbjct: 428 GYILGIM-----LGFGVIGVWMG 445