Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., MATE family efflux transporter from Dickeya dianthicola ME23

 Score =  479 bits (1234), Expect = e-140
 Identities = 246/458 (53%), Positives = 326/458 (71%), Gaps = 2/458 (0%)

Query: 1   MHRYKKEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILF 60
           M +Y  EA +L+ LA PV+IA V+QT MG VDTIMAG  SA DMAAV++  SIWLP+ILF
Sbjct: 1   MQKYLSEARHLLALAIPVIIAQVSQTSMGVVDTIMAGSYSATDMAAVAVGTSIWLPAILF 60

Query: 61  GVGLLMALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFM-DVE 119
           G GLLMAL PVVA LNG+GR+ +I  +  Q  +LA  +S+  + VL+Q +++I  M D  
Sbjct: 61  GHGLLMALTPVVANLNGSGRRDRIAHQTQQAFLLAAAISILTMIVLYQGKYVINLMHDGA 120

Query: 120 EAMATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVY 179
             +A K V Y+HA+++ VP YL +Q LRS  +G+S TKP MVIGFIGLL+NIP+N++F++
Sbjct: 121 PELADKAVKYLHALLWGVPGYLFYQVLRSQCEGLSKTKPGMVIGFIGLLINIPINYVFIH 180

Query: 180 GKFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFR 239
           GK G PELGGVGCGVATA VYW+M+L++  Y   +  L  ++ F+   KP    L RL  
Sbjct: 181 GKLGMPELGGVGCGVATASVYWMMMLMMAAYSRHAYWLKDIRQFKPQLKPDWAVLKRLSS 240

Query: 240 LGFPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVG 299
           +G P+A AL FEVTLFA+VALLV PLG   VA HQ+ALNFSSL+F+ P+S+G A +IRVG
Sbjct: 241 MGLPIALALLFEVTLFAIVALLVLPLGVVNVAGHQIALNFSSLMFVLPLSVGVAATIRVG 300

Query: 300 HKLGEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLF 359
           H+LGE   + A +AA  G+ TG+  A  TA+ T+  RE IA+LY +N  VVA+A  L+L 
Sbjct: 301 HRLGEGSAEAARVAARTGIATGVLLAMCTAIFTITLREPIAMLYNKNPDVVAMASHLMLL 360

Query: 360 AAIYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAK 419
           AA+YQ  DAVQ + +G LRGYKD  AIF  TFI+YW+LGLP+GY L +T+ L  + +G  
Sbjct: 361 AAVYQISDAVQTIGSGVLRGYKDTRAIFFITFIAYWLLGLPSGYALALTDILVPR-MGPA 419

Query: 420 GFWLGFIIGLSAAALMLGQRLYWLQKQSDDVQLHLAAK 457
           GFW GFIIGL+++A M+  R+ W+Q+QS    L  AA+
Sbjct: 420 GFWWGFIIGLTSSATMMVLRIRWVQRQSPARILARAAR 457