Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., MATE family efflux transporter from Dickeya dianthicola ME23

 Score = 79.3 bits (194), Expect = 2e-19
 Identities = 85/386 (22%), Positives = 155/386 (40%), Gaps = 23/386 (5%)

Query: 11  LIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASI-WLPSILFGVGLLMALV 69
           +++LA P +   V Q  +G V+T     + A  +A V++   +  L  ++   G+   L 
Sbjct: 33  MLRLALPTIAVLVVQALVGVVETYFVSSLGADVLAGVAVVFPVLMLMQMMANGGIGGGLS 92

Query: 70  PVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAV-LFQTQFIIRFMDVEEAMATKTVG 128
             +++ +GAGR       V  G+I+A ++     A+ L   + +   M V+    +  + 
Sbjct: 93  SAISRASGAGRWQDAQALVWHGVIIAGVLGAAFAAIILIGGEALYHVMGVKGPSLSAALA 152

Query: 129 YMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGAPELG 188
           Y + V    P   L   L +   G   TK    I  +G ++ +PL+ + + G    P  G
Sbjct: 153 YSNLVFAGAPLVWLVALLSAALRGAGDTKTPARITLLGGVILLPLSPVLILGWGPIPSFG 212

Query: 189 GVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIR-LFRLGFPVAAA 247
             G G+A  + Y    LLL+ ++ ++  +  + +      P    L + +  +GF  A  
Sbjct: 213 VAGAGIAILLYYLFATLLLVRHMRSANSVIRLSI-----APLSSRLFKDVLGVGFLSAIG 267

Query: 248 LFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGEQDT 307
                    VV  +V   G   +A + +A     L       +G A+   VG  +G    
Sbjct: 268 TVQINLTVTVVTAVVGLFGPDAIAGYGIASRLDYLQIPLLFGLGTAIMTMVGVNIGAGQK 327

Query: 308 K--------GAAIAANVGLMTGLATACITALLTVLFREQIALL-----YTENQVVV--AL 352
           +        GAA+A     + GL  A    L   LF +   +L     Y +N      A+
Sbjct: 328 QRAQRIAWVGAAVAFTFTELIGLGAAVYPRLWLSLFSDDHVILAAGTRYLQNVAPFYGAI 387

Query: 353 AMQLLLFAAIYQCMDAVQVVAAGSLR 378
            + + L+ A       +  V AG++R
Sbjct: 388 GIGMALYFAGQGAKRVLWPVLAGTVR 413