Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 471 a.a., MATE family efflux transporter from Dickeya dadantii 3937

 Score =  116 bits (291), Expect = 1e-30
 Identities = 105/438 (23%), Positives = 195/438 (44%), Gaps = 14/438 (3%)

Query: 11  LIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGVGLLMALVP 70
           LIK+  PV++A++ Q+G    D    G +    +AA+S++  I   +   G+GL +A   
Sbjct: 22  LIKMGVPVILANLLQSGYIMTDAFWVGRLGDKAVAAISVSQPIIFLAFALGIGLSIAGTT 81

Query: 71  VVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAV-LFQTQFIIRFMDVEEAMATKTVGY 129
           +VAQ  GA           Q  +L+LL S+PI  V  F T +++  +  +E +    + +
Sbjct: 82  LVAQCIGARLHQDANAIAAQVFMLSLLFSIPISVVGYFLTPWMLHTLGTQEDVFPLALSF 141

Query: 130 MHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGAPELGG 189
           +  +I  +     F  L+S   G    +  ++I    L+LN  ++ +F++G    P  G 
Sbjct: 142 LRVLISGLVFTFGFAMLQSLMRGAGEVRIPLLITLGTLILNAIMDPLFIFGYGIIPAFGV 201

Query: 190 VGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLGFPVAAALF 249
            G G+AT I   I ++     +  S+    +K++    KP+   +  + RLG P +  L 
Sbjct: 202 TGAGIATLINQGIAMVAGFLALRFSR--ISLKIYFCAMKPRFDMVKSVVRLGMPASIELC 259

Query: 250 FEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGEQDTKG 309
                 + +  LV  LG+ V AA+ V +N ++LV +  + +  A +  VG  +G    + 
Sbjct: 260 AHALGASGMMSLVTGLGTAVTAAYGVVININALVIVPAIGMSIATATLVGQNVGAGKFER 319

Query: 310 AAIAANVGLMTGLATACITALLTVLFREQIALLYT--ENQVVVALAMQLLLFAAIYQCMD 367
           A     +       T  +  L    F   I  L+   + QV+    +   + A  Y  + 
Sbjct: 320 ARAIGRLSATISFLTQTMIGLTGFAFAPDIIGLFAPEQTQVINHGTLFFHIIAPGYGLI- 378

Query: 368 AVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKGFWLGFII 427
            +Q+   G+ R             IS W++ +P  +  G++++ +   LG  G W  F I
Sbjct: 379 GLQMALNGAFRATGRTMTTMTLALISQWLVQIPLAW--GLSHYTS---LGISGLWWAFPI 433

Query: 428 G---LSAAALMLGQRLYW 442
               ++A  ++L +R+ W
Sbjct: 434 TNLLMAAITIILFERIDW 451