Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., putative efflux protein, MATE family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  112 bits (281), Expect = 2e-29
 Identities = 95/404 (23%), Positives = 171/404 (42%), Gaps = 8/404 (1%)

Query: 6   KEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGVGLL 65
           K  S L+ LA P+++A+V QT    +DT   G + A  +AAVS++  I    +  G GL 
Sbjct: 13  KLISALVSLALPIILANVLQTAYQLIDTFWLGRLGANAVAAVSVSFPILFLILSLGAGLT 72

Query: 66  MALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAV-LFQTQFIIRFMDVEEAMAT 124
           +A   +V+Q  GA  Q  +     Q + +   +SV +  V  F    +++ +     + +
Sbjct: 73  LAGTVLVSQHKGANNQKMVNSASSQTVFVVFCISVLLAIVGYFAAGPLMKLIGAGPEIYS 132

Query: 125 KTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGA 184
            +V Y            +F   +S   G+      + +  + +LLN+ L+ +F+YG    
Sbjct: 133 DSVDYFKVSSLGFVFLFMFFVFQSLMRGIGNVMLPVYVVLVTVLLNLVLDPLFIYGFGPV 192

Query: 185 PELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFE-TFHKPQPKELIRLFRLGFP 243
           P  G  G  VA+ I   +  +  ++ +   K    +   E  +  P  K   +LF+LG P
Sbjct: 193 PGFGVAGAAVASVITQGLSAIAGIYVMWKGKHGIQIHFSEMKWDLPWAK---KLFQLGLP 249

Query: 244 VAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLG 303
            +           ++ +LV   GS  VAA+ V     S V +  + +  A +  VG  +G
Sbjct: 250 SSMEQSARALGMTMMVVLVTSFGSETVAAYGVGARMLSFVIVPALGLAIATTTLVGQNVG 309

Query: 304 EQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQ--VVVALAMQLLLFAA 361
            +  K A     + +           +L  +F E +   +  N+  V+   A+ + +   
Sbjct: 310 ARKLKRAEKTGFLSIKVAFIGLTAIGILLFVFAEDLVRFFVPNEPKVIEDGALFIKIMGP 369

Query: 362 IYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYIL 405
            +  +  VQ V  G+  G     A    +F++ WV+  P GY L
Sbjct: 370 SFGFL-GVQQVINGTFNGAGFTKASMFISFLNLWVIRFPVGYYL 412