Pairwise Alignments

Query, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., Na(+)/drug antiporter from Alteromonas macleodii MIT1002

 Score =  404 bits (1037), Expect = e-117
 Identities = 204/445 (45%), Positives = 298/445 (66%)

Query: 3   RYKKEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGV 62
           R+  E  +++KLA P+L+A + Q  MG  DTIMAG  SA DMAAV++  SI +P + F  
Sbjct: 5   RFLLEGRDILKLAWPLLVAQITQMLMGVSDTIMAGRYSATDMAAVALGFSITVPLLCFIQ 64

Query: 63  GLLMALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEAM 122
           G+ +AL P++++L G      I     Q   L   V + +  ++  T+ I+    +   +
Sbjct: 65  GIALALPPIISRLQGNKNLSGIADASQQAGYLVFFVGLAVAGLIPFTESIVALFPMAPEL 124

Query: 123 ATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKF 182
            T TV Y+  V+FA+P + L+Q LR++ +G+  TKP M+I  IGL+ NI  N++F+YG  
Sbjct: 125 FTITVDYVLYVLFAMPGFALYQWLRNYCEGLGKTKPTMIITVIGLMANIVGNYLFIYGVG 184

Query: 183 GAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLGF 242
             P +GG GCG+ATAIV + ML+  + Y+  +  L    +F   +KP    + R F++G 
Sbjct: 185 PLPAMGGAGCGIATAIVIYTMLIATVIYVRFAPALQKYNLFGQLYKPNMVTINRTFKMGL 244

Query: 243 PVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKL 302
           P+A  + FEVTLF++VALL+AP G+T VAAHQVALNFS+L+FMFPMSIG A +IR+G+++
Sbjct: 245 PIAMTILFEVTLFSLVALLLAPFGATTVAAHQVALNFSALMFMFPMSIGMAAAIRIGYRI 304

Query: 303 GEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAI 362
           G+ + + A IAA   ++ G  TA  TA  T++ +  I  LYT ++ V  LA  LL++AA+
Sbjct: 305 GQNNPRQAKIAARTAILIGFFTAACTASFTLVAKGFIIGLYTSDEAVYTLANALLIYAAL 364

Query: 363 YQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKGFW 422
           +Q  DAVQV++A +LRGYKD TA+F  TF+SYW++GLPTG ILG TNW+T +P+ A GFW
Sbjct: 365 FQLSDAVQVISANALRGYKDTTAMFIITFVSYWLIGLPTGVILGRTNWITAEPMAAAGFW 424

Query: 423 LGFIIGLSAAALMLGQRLYWLQKQS 447
           +GFI+GLSAAA+MLG RL ++Q+ S
Sbjct: 425 IGFIVGLSAAAVMLGARLLYIQRPS 449