Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  144 bits (362), Expect = 2e-38
 Identities = 103/396 (26%), Positives = 194/396 (48%), Gaps = 14/396 (3%)

Query: 284 AEVAQQLVTQLNQWSTLAQQHIVQGKQEVTSTISAVTLTQQISGTLLV-LAILAVWF--- 339
           A+    L+ QL   + +A    +Q   E         +T  I+G L+  + +L +W    
Sbjct: 324 ADARWTLMLQLPLSAVMADSQKLQSDLEAQRKTDIFGMT--IAGLLIAGIGLLVIWLVGH 381

Query: 340 GLRRWIGRA---LNNITRHLAQLTQHKLNHRLDLVGPQDFQNVAAQLNQVIVSTHESLAL 396
           G+ R + +    LN+I +    LT+   + R D +G      +A   N  ++     +  
Sbjct: 382 GIARPLKQMVAMLNDIAQGEGDLTRRLTSDRADELGA-----IANGFNTFLIKLQGMITQ 436

Query: 397 VTRNCETLYQTAELSHGSAEQSNQSLAAQNQALLTMAATINQLDASIREIAGVSHDSYTD 456
           V  + + +  ++E +   A ++NQ +  Q   +  +A  ++++ A+ +++A  +  +   
Sbjct: 437 VVSSVQKVSDSSEHTADIAIRTNQGVHKQMVEIDQVATAVHEMTATAQDVARNATQAAQA 496

Query: 457 SVEAAEHSAQGVKVIEQNQQRLQALETTLAVNDAAMSELNQRVTSIREMVDMISGIADST 516
           +  A + ++QG++++      + AL   +    + +  L +   +I  ++  I GIA+ T
Sbjct: 497 ASHADQAASQGMRIVRDTSTSIGALAEEIGKAVSVVQTLAKDSENINAILTAIRGIAEQT 556

Query: 517 NLLALNAAIEAARAGEQGRGFAVVADEVRKLASDTSKQTTNIRDMMNELVTAASKSRQAV 576
           NLLALNAAIEAARAGEQGRGFAVVADEVR LA  T K T  I+ M+ +L        + +
Sbjct: 557 NLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQKATEEIQTMIQQLQQGTRDVVRVM 616

Query: 577 DESRKEMVTALQSSEEVKSTFMQIERAVAHIRTRVEQITQATEEQKRATADVNKAVAQIS 636
           ++S+     ++Q + +       I +AV+ I     QI  A EEQ     D+N+ V  I 
Sbjct: 617 EDSQSRTDESVQHAAKAAEALETITQAVSVINDMNTQIASAAEEQSAVAEDINRNVINIG 676

Query: 637 EQGQETKRQLDAMLESAEQVAEIAGHQQAMLHKYEL 672
           +   E     D    ++  + ++A  Q+ +++++++
Sbjct: 677 QVANEVAGGADESSAASADLTKLAEQQRRLINQFKV 712