Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  144 bits (364), Expect = 1e-38
 Identities = 96/366 (26%), Positives = 183/366 (50%), Gaps = 2/366 (0%)

Query: 309 KQEVTSTISAVTLTQQISGTLLVLAILAVWFGLRRWIGRALNNITRHLAQLTQHK--LNH 366
           K +  + +S    +  I+  + V+ I+A+   L R + + L+ +TR +  +   +  L  
Sbjct: 264 KDKSFAMLSEFRTSAVIATFIAVVIIIALLGMLIRILMQPLHLMTRAMQDIADGEGDLTR 323

Query: 367 RLDLVGPQDFQNVAAQLNQVIVSTHESLALVTRNCETLYQTAELSHGSAEQSNQSLAAQN 426
           RL +    +F  +    N+ +   H S+  V+   E + + A     ++  S  +   Q 
Sbjct: 324 RLTIQNHDEFGMLGNAFNRFVERIHTSIREVSSATEHVNEVALRVVSASNSSMVNSDEQA 383

Query: 427 QALLTMAATINQLDASIREIAGVSHDSYTDSVEAAEHSAQGVKVIEQNQQRLQALETTLA 486
               ++AA INQL A+ +EIA  +  +   + +A   +  G +V+E+N + +  L + ++
Sbjct: 384 NRTNSVAAAINQLGAAAQEIARNAAQASHQASDARHLAEDGQQVVERNIKAMNQLSSMIS 443

Query: 487 VNDAAMSELNQRVTSIREMVDMISGIADSTNLLALNAAIEAARAGEQGRGFAVVADEVRK 546
            + + +  LN +  +I +++++I+ I+  TNLLALNAAIEAARAGE GRGFAVVADEVR 
Sbjct: 444 ASSSNIEALNSKTVNIGQILEVITSISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRN 503

Query: 547 LASDTSKQTTNIRDMMNELVTAASKSRQAVDESRKEMVTALQSSEEVKSTFMQIERAVAH 606
           LA  T +    ++ M+ EL   A +S   + ES++  + ++  +         + + +  
Sbjct: 504 LAHRTQESAQQVQKMIEELQVGARESVSTMGESQRHSLESVDIANLAGERLNSVTQRIGE 563

Query: 607 IRTRVEQITQATEEQKRATADVNKAVAQISEQGQETKRQLDAMLESAEQVAEIAGHQQAM 666
           I    + +  ATEEQ      +N  + +I+   QE    L + L +   + + A   + +
Sbjct: 564 IDGMNQSVATATEEQTSVVESINMDITEINTLNQEGVENLQSTLRACADLEQQAARLKQL 623

Query: 667 LHKYEL 672
           +  + +
Sbjct: 624 VGSFRI 629