Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  145 bits (367), Expect = 4e-39
 Identities = 101/331 (30%), Positives = 162/331 (48%), Gaps = 8/331 (2%)

Query: 344 WIGRALNNITRHLAQLTQHKLNHRLDLVGPQDFQNVAAQLNQVIVSTHESL-ALVTR--- 399
           W  R L  + R   Q T   L  ++      D +   A+L   I+S    L   +TR   
Sbjct: 193 WQQRGLKRLLRLAEQTTSDPLIAQMYT----DSRGAQARLEMSILSQEARLKTCLTRLQD 248

Query: 400 NCETLYQTAELSHGSAEQSNQSLAAQNQALLTMAATINQLDASIREIAGVSHDSYTDSVE 459
             E L   A  S+  A  S+  L  Q      +A  +NQ+ A+ +E+A     +   + E
Sbjct: 249 TAEHLNDQAAQSNTLAHNSSSGLERQRVETEQVATAVNQMAATTQEVASHVQRTADATQE 308

Query: 460 AAEHSAQGVKVIEQNQQRLQALETTLAVNDAAMSELNQRVTSIREMVDMISGIADSTNLL 519
           A   + +G  +  + ++ +Q L   +      +++L +    I  +VD+I GIAD TNLL
Sbjct: 309 ANRLTGRGRDIAGETREAIQRLSVAVGETGVTVTQLAKDSDEIGGVVDVIKGIADQTNLL 368

Query: 520 ALNAAIEAARAGEQGRGFAVVADEVRKLASDTSKQTTNIRDMMNELVTAASKSRQAVDES 579
           ALNAAIEAARAGE GRGFAVVADEVR+LA  T++ T  I  ++ +L   A+ + Q +D  
Sbjct: 369 ALNAAIEAARAGEMGRGFAVVADEVRQLAQRTAESTGQIHALIAKLQQTAAAAVQTMDAG 428

Query: 580 RKEMVTALQSSEEVKSTFMQIERAVAHIRTRVEQITQATEEQKRATADVNKAVAQISEQG 639
            ++    +    E     + I  AVAHI     QI  ATEEQ     ++++ ++ I+   
Sbjct: 429 HRQAEEGVARVMEADQALVGISEAVAHITDMTTQIAAATEEQSSVAEEISRNISTIALLA 488

Query: 640 QETKRQLDAMLESAEQVAEIAGHQQAMLHKY 670
            +T  Q     + +E++   A  Q +++ ++
Sbjct: 489 DQTSEQAMNSAQLSEELTHTANTQYSLVERF 519