Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  141 bits (355), Expect = 1e-37
 Identities = 96/355 (27%), Positives = 177/355 (49%), Gaps = 15/355 (4%)

Query: 328 TLLVLAILAVWFGL-----RRWIGRALNNITRHLAQLTQHK--LNHRLDLVGPQDFQNVA 380
           T L++ +L + FGL      + I + +  ++  L  + Q +  L H L + G  +   +A
Sbjct: 294 TALIVGVLVLIFGLIAAAFSKVIVKPIGQVSTGLQSIAQGEGDLRHELQVQGKDETAELA 353

Query: 381 AQLNQVIVSTHESLALVTRNCETLYQTAELSHGSAEQSNQSLAAQNQALLTMAATINQLD 440
              N+ + +  + +  +      L   ++++   A   N++   Q +A+  ++   N++ 
Sbjct: 354 GWFNKFLAAIRQLIQHIGAASANLQNASKVNSEVAHNMNEAAGRQREAVELVSTAFNEMV 413

Query: 441 ASIREIAGVSHDSYTDSVEAAEHS----AQGVKVIEQNQQRLQALETTLAVNDAAMSELN 496
           A+  E+A     S + + E+AE+     A+G + IE     +  L   L  +  AM EL 
Sbjct: 414 ATANEVAR----SCSGAAESAENGHRRVAEGKQQIEVTTDNVNRLGRRLTESSQAMVELE 469

Query: 497 QRVTSIREMVDMISGIADSTNLLALNAAIEAARAGEQGRGFAVVADEVRKLASDTSKQTT 556
               SI +++  I  IA+ TNLLALNAAIEAARAG+QGRGFAVVADEVR LA  TS  T 
Sbjct: 470 AGSRSINQILGTIRAIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRALAKRTSDSTG 529

Query: 557 NIRDMMNELVTAASKSRQAVDESRKEMVTALQSSEEVKSTFMQIERAVAHIRTRVEQITQ 616
            I  ++  L     +  Q +         ++ S E  + +F  I+ +V  IR +  QI+ 
Sbjct: 530 EIEQLLGTLENKTQEVTQKMGSCLDLSRASVSSIESARDSFEGIQTSVNEIRDQNLQISA 589

Query: 617 ATEEQKRATADVNKAVAQISEQGQETKRQLDAMLESAEQVAEIAGHQQAMLHKYE 671
           A EEQ     ++N+ + QI ++ +  +   ++  + + +++ ++     ++ +++
Sbjct: 590 AAEEQHSVAEEINRHIQQIYDEARLVESLANSAQDDSGRLSNLSDELNGLVGRFK 644