Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 664 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  137 bits (344), Expect = 2e-36
 Identities = 111/423 (26%), Positives = 197/423 (46%), Gaps = 21/423 (4%)

Query: 258 QAQAVIEQIINKLEDAQQQNKDFASAAEVAQQLVTQLNQWSTLAQQHIVQGKQEVTSTIS 317
           Q    + Q    L+ ++  N+  AS   +     T     + L    I   + +V  T++
Sbjct: 254 QVSKALAQRDQALQRSEFDNQGVASTFYMRPIAGTPWFLATALPTALITAQRDDVLGTLA 313

Query: 318 AVTLTQQISGTLLVLAILAVWFGLRRWIGRALNNITRHLAQLT-QHKLNHRLDLVGPQDF 376
            + +       +L+L +LAV + +R+ + R  +  T   A  T    L  R+ +    + 
Sbjct: 314 LLQIPM-----VLLLVLLAV-YAIRQLVQRMKSLKTNIDALSTGDADLTRRITIRAEDEL 367

Query: 377 QNVAAQLNQVIVSTHESLALVTRNCETLYQTAELSHGSAEQSNQSLAAQNQALLTMAATI 436
             +   +N+ IV     +  VT       Q       S EQ  ++ A  NQ L+  A+  
Sbjct: 368 GAIGHSVNRFIVYLQNMIGEVT-------QATGAMSSSLEQLQRTSAHTNQILVRHASET 420

Query: 437 NQLDASIREIAGVSHDSYTDSVEAA-------EHSAQGVKVIEQNQQRLQALETTLAVND 489
           +Q   +I E++  +     ++ E A       EH+ +   V+ +    + AL   ++   
Sbjct: 421 DQTVTAITEMSSTADTVAQNAAETAAFTQRANEHADRSRVVVGEASNSVSALIGEVSSAT 480

Query: 490 AAMSELNQRVTSIREMVDMISGIADSTNLLALNAAIEAARAGEQGRGFAVVADEVRKLAS 549
            ++  + Q    I E + +I  IA  TNLLALNAAIEAARAGEQGRGFAVVADEVR LA+
Sbjct: 481 HSVENMRQDAARITETLGVIGAIAGQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAA 540

Query: 550 DTSKQTTNIRDMMNELVTAASKSRQAVDESRKEMVTALQSSEEVKSTFMQIERAVAHIRT 609
            T   T+ I +M+  L    S S  A++ ++    +A  ++  V +   ++  +V+HI  
Sbjct: 541 RTQASTSQINEMLTRLTAGVSSSVAAMENTQASCQSAADATARVNTGLDEMAGSVSHINN 600

Query: 610 RVEQITQATEEQKRATADVNKAVAQISEQGQETKRQLDAMLESAEQVAEIAGHQQAMLHK 669
              QI  A E+Q   T ++N+++ QI +  +E  +   A   + + + +  G   A++ +
Sbjct: 601 LSTQIATAAEQQSAVTEEINRSMVQIRQMVEELVQSGHATETNTQSLLDANGRVIALMGR 660

Query: 670 YEL 672
           +++
Sbjct: 661 FKV 663