Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  143 bits (360), Expect = 2e-38
 Identities = 106/360 (29%), Positives = 181/360 (50%), Gaps = 15/360 (4%)

Query: 321 LTQQISGTLLVLAILAVWFG------LRRWIGRALNNITRHLAQ--LTQHKLNHRLDLVG 372
           LT  ISG +L   ++A+  G      + R I +A+ +  R +AQ  LTQ  +  R D  G
Sbjct: 188 LTWMISGIVLAF-LIAIIIGVLITRLITRPIAQAVQSAQR-IAQGDLTQAIITERTDEAG 245

Query: 373 PQDFQNVAAQLNQVIVSTHESLALVTRNCETLYQTAELSHGSAEQSNQSLAAQNQALLTM 432
                 +   L+ +      +L  +    + L   AE      ++S++ L  QN  +   
Sbjct: 246 -----QLLMALSDMQGGLKSTLVEIANASDQLASAAEELSAVTDESSRGLTRQNDEIQQA 300

Query: 433 AATINQLDASIREIAGVSHDSYTDSVEAAEHSAQGVKVIEQNQQRLQALETTLAVNDAAM 492
           A  +NQ+ A++ E+A  +  +   S +A   +  G + +EQ    + ++   +  +  ++
Sbjct: 301 ATAVNQMTAAVDEVASNAVSTSEASRQATTEAEDGRQQVEQAVSGMSSMVVEINDSTQSV 360

Query: 493 SELNQRVTSIREMVDMISGIADSTNLLALNAAIEAARAGEQGRGFAVVADEVRKLASDTS 552
           ++L  +V  I +++D+I GIAD TNLLALNAAIEAARAGEQGRGFAVVADEVR LA  T 
Sbjct: 361 ADLAGQVREIGKVIDVIRGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRTQ 420

Query: 553 KQTTNIRDMMNELVTAASKSRQAVDESRKEMVTALQSSEEVKSTFMQIERAVAHIRTRVE 612
             T +I  M+ ++ T A  +  A+++S          ++       +I  +VA I  R  
Sbjct: 421 ISTVDIEKMIGDVQTGADDAVAAMNKSLTWANNTQTLAQNAGEALQRITASVAKINERNL 480

Query: 613 QITQATEEQKRATADVNKAVAQISEQGQETKRQLDAMLESAEQVAEIAGHQQAMLHKYEL 672
            I  A+EEQ +   +V++ +  I +   +T         S++ ++ +A     ++ K++L
Sbjct: 481 VIASASEEQAQVAREVDRNLLNIQDLSTQTAAGAHQTNASSQDLSRLATSFNVLVSKFQL 540