Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  142 bits (358), Expect = 5e-38
 Identities = 99/360 (27%), Positives = 178/360 (49%), Gaps = 6/360 (1%)

Query: 313 TSTISAVTLTQQISGTLLVLAILAVWFGLRRWIGRALNNITRHLAQLTQHKLNHRLDLVG 372
           TS + A+ +       LL L I  +   L   +G A+ +I +    LT+     RL +  
Sbjct: 273 TSALIAMLIAVVAIAVLLSLLIQVLLRPLTT-MGVAMQDIAQGEGDLTR-----RLVVTS 326

Query: 373 PQDFQNVAAQLNQVIVSTHESLALVTRNCETLYQTAELSHGSAEQSNQSLAAQNQALLTM 432
             +F  V +  NQ +   H S++ V+     ++  ++    S+  S      Q+    ++
Sbjct: 327 KDEFGEVGSAFNQFVERIHASISEVSSATRQVHDLSQRVMASSNASIIGSDEQSARTNSV 386

Query: 433 AATINQLDASIREIAGVSHDSYTDSVEAAEHSAQGVKVIEQNQQRLQALETTLAVNDAAM 492
           AA IN+L A+ +EIA  + D+   +  A+E +  G KV+EQ    +  L   ++++   +
Sbjct: 387 AAAINELGAATQEIARNAADASQHASGASEQADDGRKVVEQTILAMSELSQKISLSCTQI 446

Query: 493 SELNQRVTSIREMVDMISGIADSTNLLALNAAIEAARAGEQGRGFAVVADEVRKLASDTS 552
             LN    +I  ++D+I GI+  TNLLALNAAIEAARAGE GRGFAVVADEVR LA  T 
Sbjct: 447 ETLNASTDNIGHILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQ 506

Query: 553 KQTTNIRDMMNELVTAASKSRQAVDESRKEMVTALQSSEEVKSTFMQIERAVAHIRTRVE 612
           +    I  M+  L   + ++   ++ S+     +++ + +     + + + +  I    +
Sbjct: 507 ESAEEIHKMITSLQVGSREAVTTMNASQTSSEESVEVANQAGERLVSVTQRIVEIDGMNQ 566

Query: 613 QITQATEEQKRATADVNKAVAQISEQGQETKRQLDAMLESAEQVAEIAGHQQAMLHKYEL 672
            +  ATEEQ      +N  + QI+   Q+    L+  L+  + +++ A   + ++  +++
Sbjct: 567 SVAAATEEQTAVVETLNVDINQINLLNQQGVANLNETLKDCDALSQQANRLKQLVDSFKI 626