Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  156 bits (395), Expect = 2e-42
 Identities = 105/425 (24%), Positives = 208/425 (48%), Gaps = 9/425 (2%)

Query: 250 YEMVLAGFQAQAVIEQIINKLEDAQQQNKDFASAAEVAQQLVTQLNQWSTLAQQHIVQGK 309
           Y   L  F    + +++I   +D Q+    F       ++L T +++   L   ++   +
Sbjct: 126 YLRQLGSFNNDILQKEMIKAQQDLQRSLPTF-------EKLETAIDELLKLNLSYVDNNR 178

Query: 310 QEVTSTISAVTLTQQISGTLLVLAILAVWFGLRRWIGRALNNITRHLAQLTQHKLNHRLD 369
            E+T  I  ++     S   L+  + AV + L   I   L  +      + +  L HRLD
Sbjct: 179 SELTELIDNISEFSVASIVALLAFMSAVTWLLTNLICSPLMQVVTQANAIAEGNLAHRLD 238

Query: 370 --LVGPQDFQNVAAQLNQVIVSTHESLALVTRNCETLYQTAELSHGSAEQSNQSLAAQNQ 427
              +G  +   +A   +++  +    +  +  +   L    +     +EQ++Q +  Q +
Sbjct: 239 RKTIGHDELGELADACSKMQNNLRLMVEEIITSATQLAHAVDEVSAVSEQTSQGMQIQQE 298

Query: 428 ALLTMAATINQLDASIREIAGVSHDSYTDSVEAAEHSAQGVKVIEQNQQRLQALETTLAV 487
            ++ +A  + ++ +++ E+A  +  +   S ++++H+  G + +      +Q +   +  
Sbjct: 299 EVMQIATAMAEMKSTVAEVARNTEVASDASRDSSQHANVGSQQMRAVNDSIQHVNQEIGR 358

Query: 488 NDAAMSELNQRVTSIREMVDMISGIADSTNLLALNAAIEAARAGEQGRGFAVVADEVRKL 547
            +  + EL  +   I  +VD+IS IA+ TNLLALNAAIEAARAGEQGRGFAVVADEVR L
Sbjct: 359 TEQRVLELESQAQQINMVVDVISNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSL 418

Query: 548 ASDTSKQTTNIRDMMNELVTAASKSRQAVDESRKEMVTALQSSEEVKSTFMQIERAVAHI 607
           A  T + T +I +++  L   A K+R+  + SR+ +   ++ S+E +    QI    + I
Sbjct: 419 AGKTQQSTGDIVEIIQNLQACAQKARETTNNSRELINHCVEQSQETQQAIEQIRHQSSQI 478

Query: 608 RTRVEQITQATEEQKRATADVNKAVAQISEQGQETKRQLDAMLESAEQVAEIAGHQQAML 667
                QI  A  EQ   + ++++ + +I+E  ++  +   +  +S  +++++A   Q  +
Sbjct: 479 ADMTIQIASACGEQDSVSEELSRNIERINESAKQVAQGSSSAAQSCAELSQLASQLQDTV 538

Query: 668 HKYEL 672
            ++ L
Sbjct: 539 QRFRL 543