Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

 Score =  171 bits (434), Expect = 6e-47
 Identities = 128/440 (29%), Positives = 212/440 (48%), Gaps = 10/440 (2%)

Query: 238 PEIKDYA-SLTAPYEMVLAGFQAQAVIEQIINKLEDAQQQNKDFASAAEVAQQLVTQLNQ 296
           PE+K+ A  L A +E ++       +     N +  AQ   +D    A    ++  Q NQ
Sbjct: 114 PELKEQARKLQARFEQMVREELEPMLQAFANNDMTTAQNIYRD--KYAPTYGEMRKQANQ 171

Query: 297 -WSTLAQQHIVQGKQEVTSTISAVTLTQQISGTLLVLAI---LAVWFGLRRWIGRALNNI 352
              TL QQ   Q    V S  +  T    I    L+++    L +   LR  +    + +
Sbjct: 172 ILDTLLQQAEQQNHASVESFEAGRTKQMVIIAAGLIISFITSLVIITNLRSRVAYLKDRM 231

Query: 353 TRHLAQLTQHKLNHRLDLVGPQDFQNVAAQLNQVIVSTHESLALVTRNCETLYQTAELSH 412
           +   A L+   L  RL+L G  +  ++    N  I   H S+  V  N + L   A    
Sbjct: 232 SSAAANLS---LRTRLELDGNDELCDIGKSFNAFIDKVHHSIEEVAENSKELATMASSVS 288

Query: 413 GSAEQSNQSLAAQNQALLTMAATINQLDASIREIAGVSHDSYTDSVEAAEHSAQGVKVIE 472
             A  +  + A+Q    + +A  I++L A++ EIA  +  +   + +A  HS +G KV+ 
Sbjct: 289 QRAHMTQSNCASQRDRTVQVATAIHELGATVSEIASNAAMAADVAKQATLHSGEGKKVVG 348

Query: 473 QNQQRLQALETTLAVNDAAMSELNQRVTSIREMVDMISGIADSTNLLALNAAIEAARAGE 532
           + Q R+Q L   L      +S L  ++  I   +D I  I++ TNLLALNAAIEAARAGE
Sbjct: 349 EVQNRIQTLVNELDNATQVVSSLATQINGISSTLDTIRSISEQTNLLALNAAIEAARAGE 408

Query: 533 QGRGFAVVADEVRKLASDTSKQTTNIRDMMNELVTAASKSRQAVDESRKEMVTALQSSEE 592
           QGRGFAVVADEVR LAS ++  T  I+ ++N L T ++++ +A+++ R +    ++ S +
Sbjct: 409 QGRGFAVVADEVRTLASRSAASTEEIQQVINRLQTESTRAVEAMEKGRSQSDVVVEFSAK 468

Query: 593 VKSTFMQIERAVAHIRTRVEQITQATEEQKRATADVNKAVAQISEQGQETKRQLDAMLES 652
              +  +I   +  I  +  Q+  ATEEQ     D+N+ V  I++   ET    D +  +
Sbjct: 469 ANQSLTEINSQIDQINDQNIQVATATEEQSTVVEDINRNVEDINQLTTETSHVADELSRA 528

Query: 653 AEQVAEIAGHQQAMLHKYEL 672
           +  +  ++     ++  +EL
Sbjct: 529 SASLQRLSSQLDKLVGSFEL 548