Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  158 bits (400), Expect = 7e-43
 Identities = 105/366 (28%), Positives = 184/366 (50%), Gaps = 6/366 (1%)

Query: 311 EVTSTISAVTLTQQISGTLLVLAILAVWFG--LRRWIGRALNNITRHLAQLTQHK--LNH 366
           EV + + AV   Q++  T L +A + ++ G  L   I   +N I +    L +    L+ 
Sbjct: 281 EVFAELDAVA--QRMMLTTLAVAAIFIFMGIFLANSIAMPINQIAKRFTDLGRGDGDLSQ 338

Query: 367 RLDLVGPQDFQNVAAQLNQVIVSTHESLALVTRNCETLYQTAELSHGSAEQSNQSLAAQN 426
           R+++ G  +   ++   N  I   H+S+  V +    L   AE     A  ++ +   Q 
Sbjct: 339 RIEVKGNDEIAQLSKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQQQR 398

Query: 427 QALLTMAATINQLDASIREIAGVSHDSYTDSVEAAEHSAQGVKVIEQNQQRLQALETTLA 486
              + +   INQ+ A+I EIA  +  +   + +A+ ++ QG  V+ + ++ +  L   + 
Sbjct: 399 DQTIQVVTAINQMGATISEIASNAATAAETANQASGNADQGRNVVNKAKEAISRLAHDIE 458

Query: 487 VNDAAMSELNQRVTSIREMVDMISGIADSTNLLALNAAIEAARAGEQGRGFAVVADEVRK 546
                + +L      I  ++D I GI++ TNLLALNAAIEAARAG+QGRGFAVVADEVR 
Sbjct: 459 NTGKVVEQLASTTQEIGSILDAIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRN 518

Query: 547 LASDTSKQTTNIRDMMNELVTAASKSRQAVDESRKEMVTALQSSEEVKSTFMQIERAVAH 606
           LAS T+  T  I+ M+N+L   A  +  A+D  +      + +S+E     M I   +  
Sbjct: 519 LASRTASSTEEIQKMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDRIHD 578

Query: 607 IRTRVEQITQATEEQKRATADVNKAVAQISEQGQETKRQLDAMLESAEQVAEIAGHQQAM 666
           I  R  Q+  ATEEQ      +N+ + +I+   + T    + + ++++ + E++G    +
Sbjct: 579 ISDRNTQVATATEEQSTVVHTINQNIEEINAINEVTTSTAEELADASKSLRELSGRLDKL 638

Query: 667 LHKYEL 672
           +  ++L
Sbjct: 639 VGNFKL 644