Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  196 bits (499), Expect = 2e-54
 Identities = 155/683 (22%), Positives = 309/683 (45%), Gaps = 41/683 (6%)

Query: 8   SLTQTLGAVFLCITILMISLSVTSLRGIERVGAQFNQLSEQALPF-ALNNAALTQNFLEQ 66
           S+ + + A F  I I+ +      LRG+ ++ + F  +S  ALP  +L+N    Q     
Sbjct: 13  SVIRRMYAGFALIIIMFVVTVAIMLRGMNQIHSNFESVSTAALPLVSLSNQTSVQLLSAD 72

Query: 67  VKYLGYGTRSQSE------QELNQVLNEWQKLDAQAGDEITRLQQNVQLLSSAEAVQQAE 120
             +  + T   +       QE  Q    +Q + A+        Q +V     A+ + + +
Sbjct: 73  KSFKDFLTTQDTSLMDGMRQEFAQSKQRFQSVLAELS------QASVNHPELAQPITELK 126

Query: 121 QLQREILHFQQLAQSILKLQQLQLSKTAQISEQAKQFRYGLSSIGPEMGRIASFLAVDNP 180
           QL+        LA   +   Q   +  A + +  ++F+           R+ S L+V   
Sbjct: 127 QLETRYFSEADLA---MDNYQAMFAAQASVQKSTREFQ-----------RLHSELSVGMK 172

Query: 181 EAMDAANRFTASASAMESAFLLL----------FIEEEMSAAQKYRQELKNRVAGLELAF 230
           E +D  +  +    A +S F+ L              +++  +K   + K  V  L  A+
Sbjct: 173 EFVDDNDSISVKVMA-KSYFIKLKDAEVITSDALASSDVAFVEKAVNQNKKAVTHLNYAY 231

Query: 231 DDFKEWYPEIKD-YASLTAPYEMVLAGFQAQAVIEQIINKLEDAQQQNKDFASAAEVAQQ 289
                  P++K+ +    A +   +   Q   V++Q    L+       + A+ A    +
Sbjct: 232 RGLTTQMPQLKERFDEPVAKFTQDIG--QKGGVLDQHNEYLQARAALYNNIANLANEVDK 289

Query: 290 LVTQLNQWSTLAQQHIVQGKQEVTSTISAVTLTQQISGTLLVLAILAVWFGLRRWIGRAL 349
            +T L  ++  A   + Q   E  S      +   + G  +VL   A+ + +   +   +
Sbjct: 290 AMTILGAFNQTATDDLNQSLAEAGSVYQQGAIKAVVIGIAVVLLATAIGYHIAHSVREPV 349

Query: 350 NNITRHLAQLTQHKLNHRLDLVGPQDFQNVAAQLNQVIVSTHESLALVTRNCETLYQTAE 409
             I + L  LTQ  +  R+++    +F  ++  +N +  + H+ L  +    + L  TA 
Sbjct: 350 TRILKTLESLTQGNMTQRIEIRYNNEFSRLSRHINSLADNLHDILVKLNSASDDLTATAS 409

Query: 410 LSHGSAEQSNQSLAAQNQALLTMAATINQLDASIREIAGVSHDSYTDSVEAAEHSAQGVK 469
            +  ++  +   L +Q +   ++AA + ++  S++E+A  + +S     +    S  G +
Sbjct: 410 TNQTTSLSAQNKLNSQREQTSSVAAAMTEMAHSVQEVANSAQNSLAMVQQVETASESGRQ 469

Query: 470 VIEQNQQRLQALETTLAVNDAAMSELNQRVTSIREMVDMISGIADSTNLLALNAAIEAAR 529
           ++  N   ++ LET L  +  A+ +L +  + I  ++D+I  IA+ TNLLALNAAIEAAR
Sbjct: 470 IMSTNISTIRQLETRLIESVEAVGDLRKMSSQIGSILDVIRNIAEQTNLLALNAAIEAAR 529

Query: 530 AGEQGRGFAVVADEVRKLASDTSKQTTNIRDMMNELVTAASKSRQAVDESRKEMVTALQS 589
           AGEQGRGFAVVADEVR LA  T++ T+ I  M++ L +++S + + ++   ++M  +++ 
Sbjct: 530 AGEQGRGFAVVADEVRVLAQRTTQSTSEIESMISNLQSSSSLASKVIESCMQDMELSVEQ 589

Query: 590 SEEVKSTFMQIERAVAHIRTRVEQITQATEEQKRATADVNKAVAQISEQGQETKRQLDAM 649
           +    S   +I+  +  I      I+QA  EQ   T  + +++  I+    E+ + +  +
Sbjct: 590 ASHANSAMEEIQALIIEISHMSTHISQAAGEQNETTTSIARSIEDINHISDESYQAMSQI 649

Query: 650 LESAEQVAEIAGHQQAMLHKYEL 672
            +++  +  +A  Q  ++H+++L
Sbjct: 650 AQTSANLTALANQQSELVHRFKL 672