Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  145 bits (366), Expect = 6e-39
 Identities = 117/435 (26%), Positives = 211/435 (48%), Gaps = 24/435 (5%)

Query: 257 FQAQAVIEQIINKLEDAQQQNKDFASAAE---VAQQLVTQLNQWSTLAQ---QHIVQGKQ 310
           FQ++ +    ++ L  A Q N  ++   +   V   +      W  + +   Q ++Q  +
Sbjct: 278 FQSENLSRSTVSSLLQAGQVNTQWSEDGQWLVVFAPIKVANQNWGIIFEMPRQSVMQDAE 337

Query: 311 EV----TSTISAVTLTQQISGTLLVLAILAVWFGLRRWIGRALNNITRHLAQLTQHK--L 364
           ++    T  +     ++ + GTL+V+  L V   +   + R +  +   L  ++  +  L
Sbjct: 338 QLDILLTEQLERGIRSELMVGTLMVVVGLLVVTLMAMRLVRPIRAVAERLQDISSGEGDL 397

Query: 365 NHRLDLVGPQDFQNVAAQLNQVIVSTHESLALVTRNCETLYQTAELSHGSAEQSNQSLAA 424
             RL +    +   +A   N  +      +  V  N   +  T E    + E + +S  A
Sbjct: 398 TQRLQVNSADEIGQLAQGFNLFMDKLQPIIRRVVDNTGQVVSTTEQVKSTVESTRRSSEA 457

Query: 425 QNQ---ALLTMAATINQLDASIREIAGVSHDSYTDSVEAAEHSAQGVKVIEQNQQRLQAL 481
           Q +   ++ T A  + Q  A + E A  + ++ +D+  AA+    G +VI  +Q ++  L
Sbjct: 458 QFKEVDSVATAAEEMTQTSAHVVENAQRAVNAASDAQRAAQ---TGDEVIRHSQMQMNQL 514

Query: 482 ETTLAVNDAAMSELNQRVTSIREMVDMISGIADSTNLLALNAAIEAARAGEQGRGFAVVA 541
              + +    + EL +  T I E++ +I GI++ TNLLALNAAIEAARAGEQGRGFAVVA
Sbjct: 515 VDRMNLAVPVVEELARNNTGIIEILSVIEGISEQTNLLALNAAIEAARAGEQGRGFAVVA 574

Query: 542 DEVRKLASDTSKQTTNIRDMMNELVTAASKSRQAVDESRKEMVTALQSSEEVKSTFMQIE 601
           DEVR LAS T      IR ++N++        +A+  S +   TA  ++E+V     Q+ 
Sbjct: 575 DEVRSLASRTQASVGEIRSVINKVELGTQDVVKAIQGSNE---TAQATAEQVADAVTQLN 631

Query: 602 R---AVAHIRTRVEQITQATEEQKRATADVNKAVAQISEQGQETKRQLDAMLESAEQVAE 658
           R   A+  I     QI QA ++Q+  +A V ++V  I +   +   + +A  +  EQ+A 
Sbjct: 632 RVFSAIHAINEMSHQIVQAAQDQQTVSAQVTQSVVNIRDLSAQILSETEASEKVGEQIAR 691

Query: 659 IAGHQQAMLHKYELN 673
           ++  QQ ++ ++++N
Sbjct: 692 LSFEQQTLVGQFKVN 706