Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  179 bits (453), Expect = 4e-49
 Identities = 130/416 (31%), Positives = 199/416 (47%), Gaps = 24/416 (5%)

Query: 259 AQAVIEQIINKLEDAQQQNKDFASAAEVAQQLVTQLNQWSTLAQQHIVQGKQEVTSTISA 318
           A  ++ Q+IN L +      +   AAE    + TQ  + +  A QH +     + S + A
Sbjct: 199 ANLILLQVINPLYN------EIKKAAEAFLDIQTQEGKNNFSASQHEINQFIWMVSLLGA 252

Query: 319 VTLTQQISGTLLVLAILAVWFGLRRWIGRALNNITRHLAQLTQH----KLNHRLDLVGPQ 374
             L    S  LL              I + +NN   HLA    H     L  R+ + G  
Sbjct: 253 FALIVTTSLALL--------------IAKRVNNAVHHLASSATHIAAGDLTQRIPVTGND 298

Query: 375 DFQNVAAQLNQVIVSTHESLALVTRNCETLYQTAELSHGSAEQSNQSLAAQNQALLTMAA 434
           +F ++A  +N+++ S  E ++    +   L   AE +   A Q+ Q++  Q      +AA
Sbjct: 299 EFSDIAKYVNRIVTSFQEVISSNRHSVSALATAAEENAAVAMQTKQNIVEQQSQTQQIAA 358

Query: 435 TINQLDASIREIAGVSHDSYTDSVEAAEHSAQGVKVIEQNQQRLQALETTLAVNDAAMSE 494
            I+Q  A++ E+A  +  +   S EA + + QG KV+E+N   ++ L   L    AAM  
Sbjct: 359 AIHQFTATVHEVAQSAGLAAEASEEAEQAAMQGRKVVEENIAMIEGLSNDLQKMLAAMQL 418

Query: 495 LNQRVTSIREMVDMISGIADSTNLLALNAAIEAARAGEQGRGFAVVADEVRKLASDTSKQ 554
           L +    I  +VD+I  I++ TNLLALNAAIEAARAGEQGRGFAVVADEVR LAS T + 
Sbjct: 419 LAKDSEDIGSVVDVIQSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQES 478

Query: 555 TTNIRDMMNELVTAASKSRQAVDESRKEMVTALQSSEEVKSTFMQIERAVAHIRTRVEQI 614
           T  I   +  L  ++  S   +++       A++ +    +   QI   V  I T   QI
Sbjct: 479 TKQILQTVQRLQQSSRDSANLIEQGVSGASKAVEKARLAGTALSQITANVDRISTMNTQI 538

Query: 615 TQATEEQKRATADVNKAVAQISEQGQETKRQLDAMLESAEQVAEIAGHQQAMLHKY 670
             A+EEQ   T ++NK +  ISE   +T        E+  ++A +A   Q  + +Y
Sbjct: 539 ATASEEQSAVTEEINKNIITISEISNQTALGAQQSSEATLELARLAESMQQEVARY 594