Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  143 bits (360), Expect = 2e-38
 Identities = 102/380 (26%), Positives = 186/380 (48%), Gaps = 12/380 (3%)

Query: 300 LAQQHIVQGKQEVTSTISAVTLTQQISG-TLLVLAILAVWFGLRRWIGRALNNITRHLAQ 358
           +  Q +   K ++ S++  +  T   S   +L + +L  W  L R I   L  + +    
Sbjct: 168 ILHQAMDSNKVQILSSVKTLNSTSVASNIAILAIMVLMTWL-LTRLICGPLAIVMKQSNA 226

Query: 359 LTQHKLNHRLDL--VGPQDF---QNVAAQLNQVIVST-HESLALVTRNCETLYQTAELSH 412
           + +  L+  +D   +G  +     N + Q+ Q +     E ++ VT+    + +  ++S+
Sbjct: 227 IAKGDLSQTMDRSSIGNDELGTLANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISN 286

Query: 413 GSAEQSNQSLAAQNQALLTMAATINQLDASIREIAGVSHDSYTDSVEAAEHSAQGVKVIE 472
            SA+     +  Q   +  +A  + Q+ A++ ++A  + DS + ++ A   S +G +   
Sbjct: 287 QSAD----GMKEQQYQITQVATAMAQMKAAVADVARNTEDSASQAMAANHKSQEGARENA 342

Query: 473 QNQQRLQALETTLAVNDAAMSELNQRVTSIREMVDMISGIADSTNLLALNAAIEAARAGE 532
              + +Q +   +      +SEL Q+ + I  +VD+I  IAD TNLLALNAAIEAARAGE
Sbjct: 343 SMVRSIQQVADIIGEAGQTVSELEQQSSQINVVVDVIRSIADQTNLLALNAAIEAARAGE 402

Query: 533 QGRGFAVVADEVRKLASDTSKQTTNIRDMMNELVTAASKSRQAVDESRKEMVTALQSSEE 592
            GRGFAVVADEVR LA  T   T  I  ++ +L   A +++ A + SR  +   ++    
Sbjct: 403 SGRGFAVVADEVRTLAGRTQDSTGEITTIIEKLQVMAKQAKDATERSRSSIDKCVEQGNH 462

Query: 593 VKSTFMQIERAVAHIRTRVEQITQATEEQKRATADVNKAVAQISEQGQETKRQLDAMLES 652
            +S  + IE ++A+I     QI  A  EQ     ++++ V  I    QE  +      ++
Sbjct: 463 SQSLMISIEESIANIADVGTQIASACSEQDSVADELSRNVENIHLASQEVAQGSQQTAQA 522

Query: 653 AEQVAEIAGHQQAMLHKYEL 672
             ++ ++A   Q  L ++++
Sbjct: 523 CRELTQLAVSLQDTLRRFKI 542